RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ELSPBP1Q96BH3 223 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 EEF2KMTQ96G04 330 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 SMG9Q9H0W8 520 aaKnown RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 SNX25Q9H3E2 840 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 MTF2Q9Y483 593 aaPredicted RBP10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 ASB3Q9Y575 518 aa10.91□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYO10Q9HD67 2058 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 HEPACAM2A8MVW5 462 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 C4BPAP04003 597 aaKnown RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 PCSK1P29120 753 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 GDI1P31150 447 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 RAP1GAPP47736 663 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 PTPN5P54829 565 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 CDH8P55286 799 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 TNNC1P63316 161 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 CYP27A1Q02318 531 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 SMARCB1Q12824 385 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 MLF2Q15773 248 aaPredicted RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 NFE2Q16621 373 aaPredicted RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 TDRD10Q5VZ19 366 aaKnown RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 DPH6Q7L8W6 267 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 ARID3BQ8IVW6 561 aaPredicted RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 FMR1NBQ8N0W7 255 aaPredicted RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 TTC16Q8NEE8 873 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 C2orf15Q8WU43 125 aaKnown RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 RSPRY1Q96DX4 576 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 PKMYT1Q99640 499 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 SYT15Q9BQS2 421 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 TRMT61BQ9BVS5 477 aaKnown RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 KCNH6Q9H252 994 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 BRD9Q9H8M2 597 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 CRTAC1Q9NQ79 661 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 HEBP1Q9NRV9 189 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 MAGEC2Q9UBF1 373 aaPredicted RBP10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 FRMD4BQ9Y2L6 1034 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 SIT1Q9Y3P8 196 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
NCKIPSD-202ENST00000413374 NCANO14594 1321 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 FAM170BA6NMN3 283 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 A8MXQ7 604 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 DPYSL4O14531 572 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZNF263O14978 683 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 AKAP3O75969 853 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 KIF20AO95235 890 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 VNN1O95497 513 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 HMGA1P17096 107 aaKnown RBP10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 WARSP23381 471 aaKnown RBP10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 BDNFP23560 247 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 NR2F2P24468 414 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 ADAM9Q13443 819 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 NCOA4Q13772 614 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 KCNB1Q14721 858 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 UBXN2BQ14CS0 331 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 ARHGAP15Q53QZ3 475 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 FAM171BQ6P995 826 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 SCARA5Q6ZMJ2 495 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 TPRG1Q6ZUI0 275 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 LIMS2Q7Z4I7 341 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 SLC9A9Q8IVB4 645 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 YAF2Q8IY57 180 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 DTWD2Q8NBA8 298 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 MYLPFQ96A32 169 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 SHDQ96IW2 340 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 LRRC3BQ96PB8 259 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 GCNAQ96QF7 691 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 PRRX2Q99811 253 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 MKNK1Q9BUB5 465 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 SLC46A2Q9BY10 475 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 GPR88Q9GZN0 384 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 DPEP3Q9H4B8 488 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 IL21Q9HBE4 155 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 HSFX1Q9UBD0 423 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRAF3IP3Q9Y228 551 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 DENND4AQ7Z401 1863 aa10.89□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRIOO75962 3097 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 MTCL1Q9Y4B5 1905 aaKnown RBP10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 KANSL1LA0AUZ9 987 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 SLC38A8A6NNN8 435 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 CLDN5O00501 218 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 GADD45BO75293 160 aaPredicted RBP10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 FGF19O95750 216 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 F11P03951 625 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRIM49P0CI25 452 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRIM49CP0CI26 452 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 PSMC3P17980 439 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 CDC25CP30307 473 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 GRIK1P39086 918 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 VAMP7P51809 220 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 STARD6P59095 220 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 RPL10AP62906 217 aaKnown RBP10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 PFKPQ01813 784 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 ORC1Q13415 861 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZNF699Q32M78 642 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 TXNDC8Q6A555 127 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 SPOPLQ6IQ16 392 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms