RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 COL11A2P13942 1736 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-202ENST00000413219 CDKN2BP42772 138 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 ARFIP2P53365 341 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 RPL7AP62424 266 aaKnown RBP18.53■□□□□ 0.56
SDCBP-202ENST00000413219 CDK16Q00536 496 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 ZNF252P-AS1Q0IIN9 211 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
SDCBP-202ENST00000413219 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TMEM154Q6P9G4 183 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TAS1R3Q7RTX0 852 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 ANKMY2Q8IV38 441 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 FAM151AQ8WW52 585 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TSSK1BQ9BXA7 367 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 APOBEC3GQ9HC16 384 aaKnown RBP18.53■□□□□ 0.56
SDCBP-202ENST00000413219 USP21Q9UK80 565 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 STYXL1Q9Y6J8 313 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TCRBV5S1A1TA0A578 114 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 EME2A4GXA9 379 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-202ENST00000413219 GYG2O15488 501 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 DKC1O60832 514 aaKnown RBP eCLIP18.52■□□□□ 0.56
SDCBP-202ENST00000413219 DHRS4L1P0CG22 281 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 TCF4P15884 667 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 SLC34A1Q06495 639 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 PIGHQ14442 188 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-202ENST00000413219 PGM5Q15124 567 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 RCN1Q15293 331 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 SNX30Q5VWJ9 437 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 SPOPLQ6IQ16 392 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 SLC30A9Q6PML9 568 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 DSTYKQ6XUX3 929 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.52■□□□□ 0.56
SDCBP-202ENST00000413219 NIPA2Q8N8Q9 360 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 DCAKDQ8WVC6 231 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 FAM84AQ96KN4 292 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 CEP170P1Q96L14 293 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 TMEM121Q9BTD3 319 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 SYNCQ9H7C4 482 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 KCNG1Q9UIX4 513 aa18.52■□□□□ 0.56
SDCBP-202ENST00000413219 ATP9AO75110 1047 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 LSM8O95777 96 aaKnown RBP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 SP100P23497 879 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 SARNPP82979 210 aaKnown RBP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 LMBRD2Q68DH5 695 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 C3orf62Q6ZUJ4 267 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 NAT8LQ8N9F0 302 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 TTC13Q8NBP0 860 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 KCNN1Q92952 543 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 STX18Q9P2W9 335 aaKnown RBP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 PCDHA10Q9Y5I2 948 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 A0A0G2JND7 137 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 CFAP69A5D8W1 941 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 TCP10L2B9ZVM9 353 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 DGAT1O75907 488 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 PSMG1O95456 288 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 IFNB1P01574 187 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 GSTA2P09210 222 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 SSTR1P30872 391 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 LIG4P49917 911 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 TUBP50607 506 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF132P52740 706 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 PLCB3Q01970 1234 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 OVGP1Q12889 678 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 EFTUD2Q15029 972 aaKnown RBP eCLIP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 ACSBG2Q5FVE4 666 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 DNAJC24Q6P3W2 148 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 TRMT1LQ7Z2T5 733 aaKnown RBP18.51■□□□□ 0.55
SDCBP-202ENST00000413219 POLNQ7Z5Q5 900 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 MFN1Q8IWA4 741 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 ARHGAP24Q8N264 748 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 CPT1BQ92523 772 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 POLIQ9UNA4 740 aa18.51■□□□□ 0.55
SDCBP-202ENST00000413219 WDR91A4D1P6 747 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 SPDYE5A6NIY4 337 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 EIF4E1BA6NMX2 242 aaKnown RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 A8MXQ7 604 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 TBC1D12O60347 775 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 SMIM24O75264 130 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 BANF1O75531 89 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 EIF2AK2P19525 551 aaKnown RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 PRKD1Q15139 912 aaPredicted RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 CCDC62Q6P9F0 684 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 LRRC74BQ6ZQY2 392 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 VPS52Q8N1B4 723 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 TEKT4Q8WW24 435 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 MCUR1Q96AQ8 359 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 TMEM120AQ9BXJ8 343 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 KCNK13Q9HB14 408 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 SLC17A7Q9P2U7 560 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF212Q9UDV6 495 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 ZNRF3Q9ULT6 936 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 F8VP50 259 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 STBD1O95210 358 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 PAPOLAP51003 745 aaKnown RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 NEK3P51956 506 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 ZBTB16Q05516 673 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 AP1B1Q10567 949 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms