RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 WDR44Q5JSH3 913 aa25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 FAM171BQ6P995 826 aa25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 SPPL2BQ8TCT7 592 aa25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 C2orf15Q8WU43 125 aaKnown RBP25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 TATDN2Q93075 761 aa25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 DNAJC25Q9H1X3 360 aa25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 N4BP1O75113 896 aaKnown RBP25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 AFPP02771 609 aaKnown RBP25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 DENND4AQ7Z401 1863 aa25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 ENOX1Q8TC92 643 aaKnown RBP25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 SAMSN1Q9NSI8 373 aaKnown RBP25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 CEP72Q9P209 647 aa25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 DNMT3BQ9UBC3 853 aaKnown RBP25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 NFE2L3Q9Y4A8 694 aa25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 CLUHO75153 1309 aa25.46■■□□□ 1.67
UBE2E3-202ENST00000410062 POU2F2P09086 479 aa25.45■■□□□ 1.66
UBE2E3-202ENST00000410062 MTIF2P46199 727 aaKnown RBP25.45■■□□□ 1.66
UBE2E3-202ENST00000410062 FAM114A1Q8IWE2 563 aa25.45■■□□□ 1.66
UBE2E3-202ENST00000410062 COL25A1Q9BXS0 654 aaPredicted RBP25.45■■□□□ 1.66
UBE2E3-202ENST00000410062 HSFX1Q9UBD0 423 aa25.45■■□□□ 1.66
UBE2E3-202ENST00000410062 HMGXB4Q9UGU5 601 aa25.45■■□□□ 1.66
UBE2E3-202ENST00000410062 PMM2O15305 246 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 HAPLN1P10915 354 aaPredicted RBP25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 PTPN1P18031 435 aaKnown RBP25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 ALDH1A3P47895 512 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 TUFMP49411 452 aaKnown RBP25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 NDST1P52848 882 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 LRMPQ12912 555 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 ORC1Q13415 861 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 MDH1BQ5I0G3 518 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 SPATA2LQ8IUW3 424 aaPredicted RBP25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 MYLPFQ96A32 169 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CD320Q9NPF0 282 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 MAGEC2Q9UBF1 373 aaPredicted RBP25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 TTC28Q96AY4 2481 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CD58P19256 250 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CYP2F1P24903 491 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CYP27A1Q02318 531 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CETN1Q12798 172 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 ELMOD1Q8N336 334 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 B3GALNT2Q8NCR0 500 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 MYCBPAPQ8TBZ2 947 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 PCED1BQ96HM7 432 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 ARID3AQ99856 593 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CORO1BQ9BR76 489 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 CYP3A43Q9HB55 503 aa25.44■■□□□ 1.66
UBE2E3-202ENST00000410062 NOTCH4Q99466 2003 aa25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 P4HA2O15460 535 aa25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 PTPN2P17706 415 aa25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 ATF6P18850 670 aa25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 SSTR3P32745 418 aaPredicted RBP25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 EPHB3P54753 998 aa25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 PLD1Q13393 1074 aa25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 MAPRE1Q15691 268 aaKnown RBP25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 PABPC1LQ4VXU2 614 aaKnown RBP25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 ZNF512Q96ME7 567 aaPredicted RBP25.43■■□□□ 1.66
UBE2E3-202ENST00000410062 C19orf67A6NJJ6 358 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 LOC730098B7Z3J9 87 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 RHOP08100 348 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 GPR15P49685 360 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 INCA1Q0VD86 236 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 ANO6Q4KMQ2 910 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 C4orf50Q6ZRC1 276 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 GET4Q7L5D6 327 aaPredicted RBP25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 ACOT1Q86TX2 421 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 GJD3Q8N144 294 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 LMO3Q8TAP4 145 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 GPR152Q8TDT2 470 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 ABCB6Q9NP58 842 aa25.42■■□□□ 1.66
UBE2E3-202ENST00000410062 SYCE3A1L190 88 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 KCNJ18B7U540 433 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 C2CD4DB7Z1M9 353 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 FSHRP23945 695 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 KCNJ12Q14500 433 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 CFAP221Q4G0U5 840 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 IQCEQ6IPM2 695 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 UNC93AQ86WB7 457 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 HS6ST3Q8IZP7 471 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 GIPC2Q8TF65 315 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 FUBP3Q96I24 572 aaKnown RBP eCLIP25.41■■□□□ 1.667e-14■□□□□ 11.3
UBE2E3-202ENST00000410062 FAXDC2Q96IV6 333 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 TNIP3Q96KP6 325 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 TWNKQ96RR1 684 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 NR2E1Q9Y466 385 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 NCOR1O75376 2440 aa25.41■■□□□ 1.66
UBE2E3-202ENST00000410062 LETM1O95202 739 aaPredicted RBP25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 BDNFP23560 247 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 MAN2A1Q16706 1144 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 DDR2Q16832 855 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 SKOR2Q2VWA4 1001 aaPredicted RBP25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 SDHAF4Q5VUM1 108 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 EHBP1Q8NDI1 1231 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 FAM200AQ8TCP9 573 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 TUBGCP2Q9BSJ2 902 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 CISHQ9NSE2 258 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 FANCLQ9NW38 375 aa25.4■■□□□ 1.66
UBE2E3-202ENST00000410062 CLDN5O00501 218 aa25.39■■□□□ 1.66
UBE2E3-202ENST00000410062 CILPO75339 1184 aa25.39■■□□□ 1.66
UBE2E3-202ENST00000410062 PRKCSHP14314 528 aaPredicted RBP25.39■■□□□ 1.66
UBE2E3-202ENST00000410062 MYL5Q02045 173 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms