RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CYP3A43Q9HB55 503 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 CEP72Q9P209 647 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 DNMT3BQ9UBC3 853 aaKnown RBP23.89■■□□□ 1.41
PTCD3-203ENST00000409783 PCDHB5Q9Y5E4 795 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 A8MXQ7 604 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 XYLBO75191 536 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 SOAT2O75908 522 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 CLSTN1O94985 981 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 LRG1P02750 347 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 HAPLN1P10915 354 aaPredicted RBP23.88■■□□□ 1.41
PTCD3-203ENST00000409783 INCA1Q0VD86 236 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 TWF1Q12792 350 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 GRASPQ7Z6J2 395 aaPredicted RBP23.88■■□□□ 1.41
PTCD3-203ENST00000409783 CCDC150Q8NCX0 1101 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 PIDD1Q9HB75 910 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 CD320Q9NPF0 282 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 HCFC1R1Q9NWW0 138 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 ABI2Q9NYB9 513 aaPredicted RBP23.88■■□□□ 1.41
PTCD3-203ENST00000409783 HMGXB4Q9UGU5 601 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 NFE2L3Q9Y4A8 694 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 NCOR1O75376 2440 aa23.88■■□□□ 1.41
PTCD3-203ENST00000409783 CLUHO75153 1309 aa23.87■■□□□ 1.41
PTCD3-203ENST00000409783 PTPN1P18031 435 aaKnown RBP23.87■■□□□ 1.41
PTCD3-203ENST00000409783 NTHL1P78549 312 aa23.87■■□□□ 1.41
PTCD3-203ENST00000409783 WDR44Q5JSH3 913 aa23.87■■□□□ 1.41
PTCD3-203ENST00000409783 MYCBPAPQ8TBZ2 947 aa23.87■■□□□ 1.41
PTCD3-203ENST00000409783 ABCB6Q9NP58 842 aa23.87■■□□□ 1.41
PTCD3-203ENST00000409783 TTC28Q96AY4 2481 aa23.87■■□□□ 1.41
PTCD3-203ENST00000409783 LOC730098B7Z3J9 87 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 ATF6P18850 670 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 NDST1P52848 882 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 CFAP221Q4G0U5 840 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 HSP90AA4PQ58FG1 418 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 CDKAL1Q5VV42 579 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 UNC93AQ86WB7 457 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 FAM114A1Q8IWE2 563 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 WHAMMQ8TF30 809 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 MYLPFQ96A32 169 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 PCED1BQ96HM7 432 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 TWNKQ96RR1 684 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 UHRF1Q96T88 793 aaPredicted RBP23.86■■□□□ 1.41
PTCD3-203ENST00000409783 ARID3AQ99856 593 aa23.86■■□□□ 1.41
PTCD3-203ENST00000409783 CYP2F1P24903 491 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 MTIF2P46199 727 aaKnown RBP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 TUFMP49411 452 aaKnown RBP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 NCAPHQ15003 741 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 SKOR2Q2VWA4 1001 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 MDH1BQ5I0G3 518 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 MIIPQ5JXC2 388 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 CREBRFQ8IUR6 639 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 CRYBG2Q8N1P7 616 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 B3GALNT2Q8NCR0 500 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 EHBP1Q8NDI1 1231 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 FUBP3Q96I24 572 aaKnown RBP eCLIP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 SEPT5Q99719 369 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 COL25A1Q9BXS0 654 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 LRRC3Q9BY71 257 aa23.85■■□□□ 1.41
PTCD3-203ENST00000409783 AVENQ9NQS1 362 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-203ENST00000409783 CILPO75339 1184 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 LETM1O95202 739 aaPredicted RBP23.84■■□□□ 1.41
PTCD3-203ENST00000409783 PTPN2P17706 415 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 ALDH1A3P47895 512 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 PLD1Q13393 1074 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 MAPRE1Q15691 268 aaKnown RBP23.84■■□□□ 1.41
PTCD3-203ENST00000409783 MAN2A1Q16706 1144 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 MGAT5BQ3V5L5 792 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 ANO6Q4KMQ2 910 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 SPATA2LQ8IUW3 424 aaPredicted RBP23.84■■□□□ 1.41
PTCD3-203ENST00000409783 UBR7Q8N806 425 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 RPGRIP1Q96KN7 1286 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 FANCLQ9NW38 375 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 USTQ9Y2C2 406 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 GREB1Q4ZG55 1949 aa23.84■■□□□ 1.41
PTCD3-203ENST00000409783 SYCE3A1L190 88 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 KCNJ18B7U540 433 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 C2CD4DB7Z1M9 353 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 NRG2O14511 850 aaPredicted RBP23.83■■□□□ 1.41
PTCD3-203ENST00000409783 RHOP08100 348 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 MAGEA11P43364 429 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 GPR15P49685 360 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 EPHA5P54756 1037 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 MYL5Q02045 173 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 CETN1Q12798 172 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 LRMPQ12912 555 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 ORC1Q13415 861 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 CUL2Q13617 745 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 KCNJ12Q14500 433 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 NFKBIBQ15653 356 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 TCP11X2Q5H9J9 407 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 C4orf50Q6ZRC1 276 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 PAQR9Q6ZVX9 377 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 ACOT1Q86TX2 421 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 HS6ST3Q8IZP7 471 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 TNIP3Q96KP6 325 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 ZNF512Q96ME7 567 aaPredicted RBP23.83■■□□□ 1.41
PTCD3-203ENST00000409783 TUBGCP2Q9BSJ2 902 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 B3GNT5Q9BYG0 378 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 ELOVL4Q9GZR5 314 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 HSD3B7Q9H2F3 369 aa23.83■■□□□ 1.41
PTCD3-203ENST00000409783 FAM124BQ9H5Z6 455 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms