RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 IL1RAPL2Q9NP60 686 aa7.11□□□□□ -1.27
LSM5-203ENST00000409782 ZCCHC17Q9NP64 241 aaKnown RBP7.11□□□□□ -1.27
LSM5-203ENST00000409782 DDX4Q9NQI0 724 aaKnown RBP7.11□□□□□ -1.27
LSM5-203ENST00000409782 PIH1D3Q9NQM4 214 aaKnown RBP7.11□□□□□ -1.27
LSM5-203ENST00000409782 LRCH1Q9Y2L9 728 aa7.11□□□□□ -1.27
LSM5-203ENST00000409782 DGKBQ9Y6T7 804 aa7.11□□□□□ -1.27
LSM5-203ENST00000409782 DOCK1Q14185 1865 aa7.11□□□□□ -1.27
LSM5-203ENST00000409782 FOCADQ5VW36 1801 aa7.11□□□□□ -1.27
LSM5-203ENST00000409782 AK9Q5TCS8 1911 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 A0A0A6YYJ9 748 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 CCL15-CCL14A0A0B4J2E2 113 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 FAM171A2A8MVW0 826 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 SGTAO43765 313 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 NRP2O60462 931 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 MPOP05164 745 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 CETPP11597 493 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 TACR1P25103 407 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 PPATQ06203 517 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 PPARAQ07869 468 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 MGAT2Q10469 447 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 SNAPC2Q13487 334 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 CCL15Q16663 113 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 C3orf36Q3SXR2 165 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 SWSAP1Q6NVH7 229 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 MIGA2Q7L4E1 593 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 GPR155Q7Z3F1 870 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 ZFPM1Q8IX07 1006 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 TEX11Q8IYF3 940 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 SCYL3Q8IZE3 742 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 PAF1Q8N7H5 531 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 FBXO15Q8NCQ5 510 aaPredicted RBP7.1□□□□□ -1.27
LSM5-203ENST00000409782 NSUN6Q8TEA1 469 aaKnown RBP7.1□□□□□ -1.27
LSM5-203ENST00000409782 NRG4Q8WWG1 115 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 BRI3BPQ8WY22 251 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 ZKSCAN4Q969J2 545 aaPredicted RBP7.1□□□□□ -1.27
LSM5-203ENST00000409782 APIPQ96GX9 242 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 FAM167AQ96KS9 214 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 CRB3Q9BUF7 120 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 LRRC27Q9C0I9 530 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 MCOLN1Q9GZU1 580 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 AGO4Q9HCK5 861 aaKnown RBP7.1□□□□□ -1.27
LSM5-203ENST00000409782 STARD7Q9NQZ5 370 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 PCDHB6Q9Y5E3 794 aa7.1□□□□□ -1.27
LSM5-203ENST00000409782 FLT1P17948 1338 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 DDTLA6NHG4 134 aaPredicted RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 OPHN1O60890 802 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 IDH1O75874 414 aaKnown RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 EFEMP2O95967 443 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 MYF5P13349 255 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 PTGS1P23219 599 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 GRK6P43250 576 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 PRIM2P49643 509 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 DSC2Q02487 901 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 TNFAIP2Q03169 654 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 MAP3K12Q12852 859 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 ELF2Q15723 593 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 PKN2Q16513 984 aaKnown RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 IZUMO3Q5VZ72 239 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 BICRALQ6AI39 1079 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 MILR1Q7Z6M3 343 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 TTC7BQ86TV6 843 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 SH3RF3Q8TEJ3 882 aaPredicted RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 ERCC4Q92889 916 aaPredicted RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 RGMAQ96B86 450 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 COLEC11Q9BWP8 271 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 LRRCC1Q9C099 1032 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 HAPLN2Q9GZV7 340 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 DHX36Q9H2U1 1008 aaKnown RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 TNFRSF12AQ9NP84 129 aa7.09□□□□□ -1.27
LSM5-203ENST00000409782 AATFQ9NY61 560 aaKnown RBP eCLIP7.09□□□□□ -1.27
LSM5-203ENST00000409782 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 HERC5Q9UII4 1024 aaKnown RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 DDX60LQ5H9U9 1706 aaKnown RBP7.09□□□□□ -1.27
LSM5-203ENST00000409782 hCG_1642624A0A1W2PR95 340 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 CXCL11O14625 94 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 TLR5O60602 858 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 APOL3O95236 402 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 CYBBP04839 570 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 CELA3BP08861 270 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 PIK3CBP42338 1070 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 CDK17Q00537 523 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 TMEM62Q0P6H9 643 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 CRHR2Q13324 411 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 BIRC3Q13489 604 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 PKN1Q16512 942 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ZNF648Q5T619 568 aaPredicted RBP7.08□□□□□ -1.28
LSM5-203ENST00000409782 OLFML2BQ68BL8 750 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 TLDC1Q6P9B6 456 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 UNQ6494/PRO21346Q6UXR6 183 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ANKRD23Q86SG2 305 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ADGRA1Q86SQ6 560 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ZNF605Q86T29 641 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 NME8Q8N427 588 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 TSPAN17Q96FV3 270 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ERO1AQ96HE7 468 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 ADI1Q9BV57 179 aa7.08□□□□□ -1.28
LSM5-203ENST00000409782 C22orf23Q9BZE7 217 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms