RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MYADML2A6NDP7 307 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 PROP1O75360 226 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 GPANK1O95872 356 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 IGLV2-14P01704 120 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 U2AF1L5P0DN76 240 aaPredicted RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 CACNA2D1P54289 1103 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 U2AF1Q01081 240 aaKnown RBP eCLIP5.5□□□□□ -1.531e-7■■■■□ 22.2
CLK1-203ENST00000409769 GTF2H3Q13889 308 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 CXorf57Q6NSI4 855 aaKnown RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 COLGALT2Q8IYK4 626 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 C3orf20Q8ND61 904 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 JPH3Q8WXH2 748 aaPredicted RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 KAT5Q92993 513 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 RNF31Q96EP0 1072 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 NAF1Q96HR8 494 aaKnown RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 MYOCQ99972 504 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 HEPHQ9BQS7 1158 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 GTPBP4Q9BZE4 634 aaKnown RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 CASS4Q9NQ75 786 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 SEMA4GQ9NTN9 838 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 FBXO34Q9NWN3 711 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 SLC17A6Q9P2U8 582 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 ARHGEF28Q8N1W1 1705 aaKnown RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 ROCK2O75116 1388 aaKnown RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 PLEKHG1Q9ULL1 1385 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 LMTK3Q96Q04 1460 aa5.5□□□□□ -1.53
CLK1-203ENST00000409769 SCAF11Q99590 1463 aaKnown RBP5.5□□□□□ -1.53
CLK1-203ENST00000409769 NT5C1B-RDH14C9J2C7 533 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 SLC43A1O75387 559 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 FGFR4P22455 802 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 PLA2G5P39877 138 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 HK3P52790 923 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 SIM1P81133 766 aaPredicted RBP5.49□□□□□ -1.53
CLK1-203ENST00000409769 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
CLK1-203ENST00000409769 CREMQ03060 361 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 PGS1Q32NB8 556 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 GADL1Q6ZQY3 521 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 NUP133Q8WUM0 1156 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 MVB12AQ96EY5 273 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 FAM167AQ96KS9 214 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 ZIM2Q9NZV7 527 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 JKAMPQ9P055 326 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 USP47Q96K76 1375 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 DIP2AQ14689 1571 aa5.49□□□□□ -1.53
CLK1-203ENST00000409769 STRCQ7RTU9 1775 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 GRM6O15303 877 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 ERN1O75460 977 aaKnown RBP5.48□□□□□ -1.53
CLK1-203ENST00000409769 HAUS5O94927 633 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 ANXA1P04083 346 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 MALP21145 153 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 ZNF280AP59817 542 aaPredicted RBP5.48□□□□□ -1.53
CLK1-203ENST00000409769 SNAPC2Q13487 334 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 NXNQ6DKJ4 435 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 FITM2Q8N6M3 262 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 C1GALT1C1Q96EU7 318 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 PDLIM2Q96JY6 352 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 MED15Q96RN5 788 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 METTL14Q9HCE5 456 aaKnown RBP5.48□□□□□ -1.53
CLK1-203ENST00000409769 KMT5AQ9NQR1 393 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 RLIMQ9NVW2 624 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 RUVBL1Q9Y265 456 aaKnown RBP5.48□□□□□ -1.53
CLK1-203ENST00000409769 FRMD4BQ9Y2L6 1034 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 EID1Q9Y6B2 187 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 CHD2O14647 1828 aaKnown RBP5.48□□□□□ -1.53
CLK1-203ENST00000409769 DLC1Q96QB1 1528 aa5.48□□□□□ -1.53
CLK1-203ENST00000409769 TCRBV7S2A1N4TA0A589 114 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 ORC4O43929 436 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 OFD1O75665 1012 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 CT47B1P0C2W7 299 aaPredicted RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 HSPA5P11021 654 aaKnown RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 CKBP12277 381 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 HSPA6P17066 643 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 LPOP22079 712 aaPredicted RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 SLC6A4P31645 630 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 PTH2RP49190 550 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 VAV2P52735 878 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 NOGQ13253 232 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 KHDC1Q4VXA5 237 aaKnown RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 ZNF362Q5T0B9 420 aaPredicted RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 FAM102BQ5T8I3 360 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 SLC4A10Q6U841 1118 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 B3GNT9Q6UX72 402 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 UBE3BQ7Z3V4 1068 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 CATIPQ7Z7H3 387 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 LNX2Q8N448 690 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 ACTRT2Q8TDY3 377 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 RGMAQ96B86 450 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 MAP3K14Q99558 947 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 ZSWIM1Q9BR11 485 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 WDCPQ9H6R7 721 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 NMRK2Q9NPI5 230 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 FOXJ2Q9P0K8 574 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 MTO1Q9Y2Z2 717 aaKnown RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 XRN1Q8IZH2 1706 aaKnown RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 POLR2AP24928 1970 aaKnown RBP5.47□□□□□ -1.53
CLK1-203ENST00000409769 CPS1P31327 1500 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 TECPR2O15040 1411 aa5.47□□□□□ -1.53
CLK1-203ENST00000409769 YTHDC2Q9H6S0 1430 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms