RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SLC22A17Q8WUG5 538 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 SHC3Q92529 594 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 KREMEN1Q96MU8 473 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 ARID3AQ99856 593 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 OXCT2Q9BYC2 517 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 CISHQ9NSE2 258 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 IMPACTQ9P2X3 320 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 H7C4K7 107 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 GABRDO14764 452 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 MBTPS2O43462 519 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 GYPCP04921 128 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 CD58P19256 250 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 PCSK1P29120 753 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 TKTP29401 623 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 GNL1P36915 607 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 STAT1P42224 750 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 RAP1GAPP47736 663 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 CDH8P55286 799 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 ZBED6P86452 979 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 SMAD4Q13485 552 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 ANKRD54Q6NXT1 300 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 ANKS3Q6ZW76 656 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 OR6B3Q8NGW1 331 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 KBTBD7Q8WVZ9 684 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 RIN2Q8WYP3 895 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 KAT5Q92993 513 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 UHRF1Q96T88 793 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 FNIP2Q9P278 1114 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 PCDHB4Q9Y5E5 795 aa17.61■□□□□ 0.41
TSPAN4-208ENST00000409531 F8VZ95 297 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 TEX28O15482 410 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 CILPO75339 1184 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 OAZ2O95190 189 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 ADH1AP07327 375 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 CCDC172P0C7W6 258 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 IL9P15248 144 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 JAM2P57087 298 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 ZNF280DQ6N043 979 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 SYCE2Q6PIF2 218 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 TMEM270Q6UE05 265 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 CNGA4Q8IV77 575 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 UBR7Q8N806 425 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 CPLX3Q8WVH0 158 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 TNIP3Q96KP6 325 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 MRPL45Q9BRJ2 306 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 NT5C1AQ9BXI3 368 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 SDCBP2Q9H190 292 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 AJAP1Q9UKB5 411 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 CNTN6Q9UQ52 1028 aa17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 TIMM13Q9Y5L4 95 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-208ENST00000409531 TCF20Q9UGU0 1960 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 NCOR1O75376 2440 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 A8MXQ7 604 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 C1RP00736 705 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 KRT5P13647 590 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 EPCAMP16422 314 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 ACO1P21399 889 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 CASP14P31944 242 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 SOX5P35711 763 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 USP8P40818 1118 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 CLCN4P51793 760 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 NDST1P52848 882 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 BPIFB4P59827 614 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 CREMQ03060 361 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 TBX2Q13207 712 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 SMAD2Q15796 467 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 TSR1Q2NL82 804 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 LNX1Q8TBB1 728 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 BAP1Q92560 729 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 ACBD6Q9BR61 282 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 S1PR5Q9H228 398 aa17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 DDX43Q9NXZ2 648 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-208ENST00000409531 OR6C75A6NL08 312 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 AKR1B15C9JRZ8 316 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 FOXN3O00409 490 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 PAEPP09466 180 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 KRT9P35527 623 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 MRPL58Q14197 206 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 SFMBT2Q5VUG0 894 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 FAM71AQ8IYT1 594 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 RBBP8NLQ8NC74 664 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 SYN2Q92777 582 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 NECAB3Q96P71 396 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 CDH9Q9ULB4 789 aa17.58■□□□□ 0.4
TSPAN4-208ENST00000409531 LRRC53A6NM62 1247 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 MFAP3LO75121 409 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 FERP16591 822 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 TSPY1Q01534 308 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 PTK2Q05397 1052 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 MAPRE1Q15691 268 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 PSMD5Q16401 504 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms