RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 PPP1R2P3Q6NXS1 205 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 TRIM72Q6ZMU5 477 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 TAS1R1Q7RTX1 841 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 SLC47A2Q86VL8 602 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 LNX1Q8TBB1 728 aaPredicted RBP16.23■□□□□ 0.19
AP1S3-204ENST00000409375 MYCBPAPQ8TBZ2 947 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 SPPL3Q8TCT6 385 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 MICAL1Q8TDZ2 1067 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 EPS8L1Q8TE68 723 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 C2orf15Q8WU43 125 aaKnown RBP16.23■□□□□ 0.19
AP1S3-204ENST00000409375 POF1BQ8WVV4 589 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 B3GALT6Q96L58 329 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 CCDC42Q96M95 316 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 TWNKQ96RR1 684 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 EMILIN2Q9BXX0 1053 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 HAUS4Q9H6D7 363 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
AP1S3-204ENST00000409375 FNIP2Q9P278 1114 aa16.23■□□□□ 0.19
AP1S3-204ENST00000409375 PLXNA4Q9HCM2 1894 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
AP1S3-204ENST00000409375 CXCL14O95715 111 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 TNFAIP3P21580 790 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 DEKP35659 375 aaKnown RBP16.22■□□□□ 0.19
AP1S3-204ENST00000409375 CYLC1P35663 651 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-204ENST00000409375 NDUFV1P49821 464 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 GOLGA8FQ08AF8 430 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 GOLGA8DPQ0D2H9 430 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 ORC1Q13415 861 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 CNGA2Q16280 664 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 SLC8B1Q6J4K2 584 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 PRSS55Q6UWB4 352 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-204ENST00000409375 SPATA2LQ8IUW3 424 aaPredicted RBP16.22■□□□□ 0.19
AP1S3-204ENST00000409375 LRRC8AQ8IWT6 810 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 CCDC170Q8IYT3 715 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 ZNF606Q8WXB4 792 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 CYFIP2Q96F07 1278 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 AGPAT1Q99943 283 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 MED10Q9BTT4 135 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 ZCWPW1Q9H0M4 648 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 DPEP3Q9H4B8 488 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 LUC7LQ9NQ29 371 aaKnown RBP16.22■□□□□ 0.19
AP1S3-204ENST00000409375 PCDHGC3Q9UN70 934 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 IRAK3Q9Y616 596 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 CDY1Q9Y6F8 540 aa16.22■□□□□ 0.19
AP1S3-204ENST00000409375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 ARHGEF15O94989 841 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 ADH1AP07327 375 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 SKILP12757 684 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 BRD2P25440 801 aaKnown RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 GPR17Q13304 367 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 PTPN14Q15678 1187 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 PTPROQ16827 1216 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 E4F1Q66K89 784 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 HGSNATQ68CP4 663 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 WDR59Q6PJI9 974 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 NOP9Q86U38 636 aaKnown RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 TMEM139Q8IV31 216 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 OR10T2Q8NGX3 314 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 SPPL2BQ8TCT7 592 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 PPP2R3CQ969Q6 453 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 FUBP3Q96I24 572 aaKnown RBP eCLIP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 NOX5Q96PH1 765 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 RTP3Q9BQQ7 232 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 RXFP1Q9HBX9 757 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 CRTAC1Q9NQ79 661 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 FAM49BQ9NUQ9 324 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 SEPT11Q9NVA2 429 aaKnown RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 NOCTQ9UK39 431 aaKnown RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 GTF3C4Q9UKN8 822 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 MAFFQ9ULX9 164 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 COLQQ9Y215 455 aaPredicted RBP16.21■□□□□ 0.19
AP1S3-204ENST00000409375 PCDHB5Q9Y5E4 795 aa16.21■□□□□ 0.19
AP1S3-204ENST00000409375 MYBPHLA2RUH7 354 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 O00370 1275 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 AKR1B10O60218 316 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 TBC1D4O60343 1298 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 ATP2C2O75185 946 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 LSM8O95777 96 aaKnown RBP16.2■□□□□ 0.18
AP1S3-204ENST00000409375 SETSIPP0DME0 302 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 OR1D2P34982 312 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 EIF4A3P38919 411 aaKnown RBP16.2■□□□□ 0.18
AP1S3-204ENST00000409375 BCAT1P54687 386 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 ARPP19P56211 112 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 SNX16P57768 344 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 SLC39A12Q504Y0 691 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 TPGS2Q68CL5 300 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 FAM171BQ6P995 826 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 LCLAT1Q6UWP7 414 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 C12orf29Q8N999 325 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 SMARCD1Q96GM5 515 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
AP1S3-204ENST00000409375 HNRNPABQ99729 332 aaKnown RBP16.2■□□□□ 0.18
AP1S3-204ENST00000409375 ZNF518BQ9C0D4 1074 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms