RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 HPCAL4Q9UM19 191 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PIN4Q9Y237 131 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 NR2E1Q9Y466 385 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF236Q9UL36 1845 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PLXNB2O15031 1838 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 SMIM28A0A1B0GU29 152 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 TCRBV5S1A1TA0A578 114 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 OPA1O60313 960 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 RARAP10276 462 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 KRT3P12035 628 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 SSTR3P32745 418 aaPredicted RBP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 GABRB2P47870 512 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 MARCKSL1P49006 195 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 FNTAP49354 379 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 NDST1P52848 882 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 GSCP56915 257 aaPredicted RBP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 COPS2P61201 443 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 SP3Q02447 781 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 HLTFQ14527 1009 aaKnown RBP eCLIP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 ACAP1Q15027 740 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 GLIPR1L2Q4G1C9 344 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 C2CD6Q53TS8 623 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 PPP1R15BQ5SWA1 713 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 DENND1BQ6P3S1 775 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 LCLAT1Q6UWP7 414 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 RPAINQ86UA6 219 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 UNC93AQ86WB7 457 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 KATNAL2Q8IYT4 538 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 HACE1Q8IYU2 909 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 MREGQ8N565 214 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 GOLGA6L1Q8N7Z2 621 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 NIPA2Q8N8Q9 360 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 PRELID2Q8N945 189 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 EXD1Q8NHP7 514 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 FNIP1Q8TF40 1166 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 LRRC45Q96CN5 670 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 DDX27Q96GQ7 796 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 ZMAT2Q96NC0 199 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 ELOVL4Q9GZR5 314 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 SMYD3Q9H7B4 428 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 SYNCQ9H7C4 482 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 BCCIPQ9P287 314 aaKnown RBP eCLIP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 PARP2Q9UGN5 583 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 GTF2IRD1Q9UHL9 959 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 RABGEF1Q9UJ41 708 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 SIP14410 1827 aa6.63□□□□□ -1.35
GTF3C3-202ENST00000409364 ESYT3A0FGR9 886 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 GOLGA6BA6NDN3 693 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 O00370 1275 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 PIRO00625 290 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 TTI1O43156 1089 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 HSF2BPO75031 334 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 RECQL4O94761 1208 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 MICAL2O94851 1124 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 PGK1P00558 417 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 OAS2P29728 719 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 COILP38432 576 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 GPD2P43304 727 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 SSR1P43307 286 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 GUCY2FP51841 1108 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 PSMC1P62191 440 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 RPL7AP62424 266 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 MRPS6P82932 125 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 CACNB2Q08289 660 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 ODF2Q5BJF6 829 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 FBXO47Q5MNV8 452 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 UBXN11Q5T124 520 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 C9orf57Q5W0N0 161 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 DUPD1Q68J44 220 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 AADACL2Q6P093 401 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 CCDC137Q6PK04 289 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 CXCL17Q6UXB2 119 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 SYDE1Q6ZW31 735 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 DPH6Q7L8W6 267 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 ADAT2Q7Z6V5 191 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 SESTD1Q86VW0 696 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 CCDC105Q8IYK2 499 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 IQCKQ8N0W5 287 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF454Q8N9F8 522 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 C12orf50Q8NA57 414 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF784Q8NCA9 323 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 TRIB2Q92519 343 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 RBM41Q96IZ5 413 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 GDAP1L1Q96MZ0 367 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 ZIC5Q96T25 663 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 FAM129AQ9BZQ8 928 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 TRIM7Q9C029 511 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 NXF3Q9H4D5 531 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 GDAP2Q9NXN4 497 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 DDX56Q9NY93 547 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 GABRQQ9UN88 632 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 HES2Q9Y543 173 aa6.62□□□□□ -1.35
GTF3C3-202ENST00000409364 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms