RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 IGSF22Q8N9C0 903 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 STKLD1Q8NE28 680 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 PIGKQ92643 395 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 ECT2Q9H8V3 914 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 RPF1Q9H9Y2 349 aaKnown RBP18.05■□□□□ 0.48
CHMP3-203ENST00000409225 MAGED2Q9UNF1 606 aaPredicted RBP18.05■□□□□ 0.48
CHMP3-203ENST00000409225 WDFY3Q8IZQ1 3526 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 ZNF638Q14966 1978 aaKnown RBP18.04■□□□□ 0.48
CHMP3-203ENST00000409225 HAPLN1P10915 354 aaPredicted RBP18.04■□□□□ 0.48
CHMP3-203ENST00000409225 HMGA1P17096 107 aaKnown RBP18.04■□□□□ 0.48
CHMP3-203ENST00000409225 GUCY2CP25092 1073 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 CDC25AP30304 524 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 C9orf57Q5W0N0 161 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 KRT79Q5XKE5 535 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 JADE1Q6IE81 842 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 SPPL2BQ8TCT7 592 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 MRPS31Q92665 395 aaKnown RBP18.04■□□□□ 0.48
CHMP3-203ENST00000409225 TIPINQ9BVW5 301 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 RAB34Q9BZG1 259 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 DUS2Q9NX74 493 aaKnown RBP18.04■□□□□ 0.48
CHMP3-203ENST00000409225 KLK13Q9UKR3 277 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 NEUROG3Q9Y4Z2 214 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 THADAQ6YHU6 1953 aa18.04■□□□□ 0.48
CHMP3-203ENST00000409225 ANK1P16157 1881 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 CYP11A1P05108 521 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 GPR15P49685 360 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 SEC13P55735 322 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 GNL2Q13823 731 aaKnown RBP18.03■□□□□ 0.48
CHMP3-203ENST00000409225 MTF1Q14872 753 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 ZRSR1Q15695 479 aaKnown RBP18.03■□□□□ 0.48
CHMP3-203ENST00000409225 ANO7Q6IWH7 933 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 MON1AQ86VX9 555 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 TTC30AQ86WT1 665 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 METTL23Q86XA0 190 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 THEM5Q8N1Q8 247 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 C2orf15Q8WU43 125 aaKnown RBP18.03■□□□□ 0.48
CHMP3-203ENST00000409225 C8orf76Q96K31 380 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 FOXP1Q9H334 677 aaPredicted RBP18.03■□□□□ 0.48
CHMP3-203ENST00000409225 KCNG1Q9UIX4 513 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 DSEQ9UL01 958 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 WNT6Q9Y6F9 365 aa18.03■□□□□ 0.48
CHMP3-203ENST00000409225 KIAA1549LQ6ZVL6 1849 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 DENND4CQ5VZ89 1909 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 CYB561D2O14569 222 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 NFICP08651 508 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 MAPK8P45983 427 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 IFNAR2P48551 515 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 LIG4P49917 911 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 ST3GAL1Q11201 340 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 ZNF268Q14587 947 aaPredicted RBP18.02■□□□□ 0.48
CHMP3-203ENST00000409225 KYAT1Q16773 422 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 SDHAF4Q5VUM1 108 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 OSCP1Q8WVF1 389 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 PYM1Q9BRP8 204 aaKnown RBP18.02■□□□□ 0.48
CHMP3-203ENST00000409225 SLC32A1Q9H598 525 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 TRPC7Q9HCX4 862 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
CHMP3-203ENST00000409225 MYO16Q9Y6X6 1858 aa18.02■□□□□ 0.48
CHMP3-203ENST00000409225 ASCC3Q8N3C0 2202 aaKnown RBP18.01■□□□□ 0.47
CHMP3-203ENST00000409225 SPAARA0A1B0GVQ0 90 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 PIRO00625 290 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 OGTO15294 1046 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 FAM189A1O60320 539 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 PAX3P23760 479 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 SMARCB1Q12824 385 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 TMEM132DQ14C87 1099 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 ZNF77Q15935 545 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 C2orf27AQ580R0 203 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 TRIM61Q5EBN2 209 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 WSCD1Q658N2 575 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 ARMCX6Q7L4S7 300 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 USP33Q8TEY7 942 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 ATP2A3Q93084 1043 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 TSPAN18Q96SJ8 248 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 MMTAG2Q9BU76 263 aaKnown RBP18.01■□□□□ 0.47
CHMP3-203ENST00000409225 EVLQ9UI08 416 aaPredicted RBP18.01■□□□□ 0.47
CHMP3-203ENST00000409225 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
CHMP3-203ENST00000409225 MSRB2Q9Y3D2 182 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 PCDHB5Q9Y5E4 795 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 OBSL1O75147 1896 aa18.01■□□□□ 0.47
CHMP3-203ENST00000409225 MYH11P35749 1972 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 NPHP3-ACAD11A0A0J9YXS1 232 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 ANO9A1A5B4 782 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 ANTXRLA6NF34 631 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 HNRNPDLO14979 420 aaKnown RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 PRPF40AO75400 957 aaKnown RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 TADA3O75528 432 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 ADRB2P07550 413 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 TRAPPC10P48553 1259 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 SIM1P81133 766 aaPredicted RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 FAM160A1Q05DH4 1040 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 LMAN2Q12907 356 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 EML3Q32P44 896 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 RASSF3Q86WH2 238 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 DCP1BQ8IZD4 617 aaKnown RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 CCDC33Q8N5R6 958 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 MDGA1Q8NFP4 955 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 CNOT6LQ96LI5 555 aaKnown RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 CYP2S1Q96SQ9 504 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms