RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CC2D1AQ6P1N0 951 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 EXOC4Q96A65 974 aa13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 SENP8Q96LD8 212 aa13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 BBC3Q96PG8 261 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 TMEM74BQ9NUR3 256 aa13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 UBQLN1Q9UMX0 589 aaKnown RBP13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 APC2O95996 2303 aa13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 ATXN2Q99700 1313 aaKnown RBP13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 PCDH15Q96QU1 1955 aa13.94□□□□□ -0.18
CHRNA1-203ENST00000409219 UPK3BL1B0FP48 263 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 UPK3BL2E5RIL1 263 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 HIP1RO75146 1068 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 REC8O95072 547 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 HMGA1P17096 107 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 DDX6P26196 483 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 PTGER3P43115 390 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 MTF1Q14872 753 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 ARMCX6Q7L4S7 300 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 SYT12Q8IV01 421 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 STKLD1Q8NE28 680 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 HAPLN2Q9GZV7 340 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 MYH11P35749 1972 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 SCN1AP35498 2009 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 HELZP42694 1942 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 BPTFQ12830 3046 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 SLC16A4O15374 487 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 TADA3O75528 432 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 OR52Z1P0C646 297 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 CCT6AP40227 531 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 TNFSF9P41273 254 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 FOSBP53539 338 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 LILRA4P59901 499 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 MCL1Q07820 350 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 SCAPQ12770 1279 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 USP4Q13107 963 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 ZNF268Q14587 947 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 ZNF77Q15935 545 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 SLC23A3Q6PIS1 610 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 PLEKHA5Q9HAU0 1116 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 FSCN3Q9NQT6 498 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
CHRNA1-203ENST00000409219 TCHHQ07283 1943 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 PLXNB3Q9ULL4 1909 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 ANAPC1Q9H1A4 1944 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 TNFRSF10BO14763 440 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 SEC24BO95487 1268 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 CYP11A1P05108 521 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 CLTAP09496 248 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 P2RY2P41231 377 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 SEC13P55735 322 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 PPP2R3AQ06190 1150 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 CRY1Q16526 586 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 EML3Q32P44 896 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 C2orf27AQ580R0 203 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 PEAR1Q5VY43 1037 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 LPCAT2Q7L5N7 544 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 TMEFF1Q8IYR6 380 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 FRMD1Q8N878 549 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 OSCP1Q8WVF1 389 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 RUSC1Q9BVN2 902 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 DDX19AQ9NUU7 478 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 DUS2Q9NX74 493 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 MBD1Q9UIS9 605 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 KIAA1024Q9UPX6 916 aa13.92□□□□□ -0.18
CHRNA1-203ENST00000409219 CEP192Q8TEP8 1941 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 LACTBL1A8MY62 500 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 K7EQS6 105 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 CLDN3O15551 220 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 HAPLN1P10915 354 aaPredicted RBP13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 IFNAR2P48551 515 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 FAM160A1Q05DH4 1040 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 STRN3Q13033 797 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 ZNF423Q2M1K9 1284 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 TMEM92Q6UXU6 159 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 LRRTM3Q86VH5 581 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 TTC30AQ86WT1 665 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 TTC16Q8NEE8 873 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 SPPL2BQ8TCT7 592 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 MRPS31Q92665 395 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 ATP2A3Q93084 1043 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 SPACA7Q96KW9 195 aa13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 ABI2Q9NYB9 513 aaPredicted RBP13.91□□□□□ -0.18
CHRNA1-203ENST00000409219 SFI1A8K8P3 1242 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 E9PMD0 336 aa13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-203ENST00000409219 CFIP05156 583 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms