RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
ATG9A-203ENST00000409033 E5RJQ4 531 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 EIF3HO15372 352 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATG9A-203ENST00000409033 SLC1A1P43005 524 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 MBTD1Q05BQ5 628 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 ARHGAP1Q07960 439 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 SLMAPQ14BN4 828 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 TAF5Q15542 800 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 ZNF484Q5JVG2 852 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 CCNYQ8ND76 341 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 CPXM1Q96SM3 734 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 HERPUD2Q9BSE4 406 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 NT5C1AQ9BXI3 368 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 EIF2AQ9BY44 585 aaKnown RBP13.19□□□□□ -0.3
ATG9A-203ENST00000409033 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 CPSF3Q9UKF6 684 aaKnown RBP13.19□□□□□ -0.3
ATG9A-203ENST00000409033 PPEF2O14830 753 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 MICAL2O94851 1124 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 SLC8A3P57103 927 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 CENPCQ03188 943 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 ZDHHC14Q8IZN3 488 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 RASGEF1CQ8N431 466 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 PABPC3Q9H361 631 aaKnown RBP13.19□□□□□ -0.3
ATG9A-203ENST00000409033 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 CNTNAP2Q9UHC6 1331 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
ATG9A-203ENST00000409033 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MYO1CO00159 1063 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 ASAP2O43150 1006 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 RECQL4O94761 1208 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 HOXC6P09630 235 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 UNGP13051 313 aaPredicted RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 SDC4P31431 198 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 AP3M2P53677 418 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 OTUD4Q01804 1114 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 PLPPR4Q7Z2D5 763 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 C4orf33Q8N1A6 199 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 BEST2Q8NFU1 509 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CFAP36Q96G28 342 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 ELAC2Q9BQ52 826 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 LRRC4CQ9HCJ2 640 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 STRIP2Q9ULQ0 834 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 TNS1Q9HBL0 1735 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CREB3O43889 395 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 NEBLO76041 1014 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 C22orf31O95567 290 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CCDC130P13994 396 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CHN1P15882 459 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 TARBP2Q15633 366 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CXCL17Q6UXB2 119 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MON1BQ7L1V2 547 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MORC4Q8TE76 937 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 STMN4Q9H169 189 aaPredicted RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 SSC5DA1L4H1 1573 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 A6NJR5 290 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CD48P09326 243 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 PEX5P50542 639 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 EIF3EP60228 445 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 SH3PXD2AQ5TCZ1 1133 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 DUPD1Q68J44 220 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 MICALCLQ6ZW33 695 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 TAOK1Q7L7X3 1001 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 SPATA18Q8TC71 538 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 NDRG1Q92597 394 aaKnown RBP13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CFAP57Q96MR6 1250 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 RUNDC3BQ96NL0 473 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 CAPN7Q9Y6W3 813 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
ATG9A-203ENST00000409033 HUS1O60921 280 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 IL18RAPO95256 599 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 ATG7O95352 703 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 RBP3P10745 1247 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 ACO1P21399 889 aaKnown RBP13.17□□□□□ -0.3
ATG9A-203ENST00000409033 NPNTQ6UXI9 565 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 NLRP14Q86W24 1093 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 RXFP2Q8WXD0 754 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
ATG9A-203ENST00000409033 CEP41Q9BYV8 373 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 I3L4J1 428 aa13.17□□□□□ -0.3
ATG9A-203ENST00000409033 SLC26A2P50443 739 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms