RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 CCT7Q99832 543 aa23.42■■□□□ 1.34
CUEDC1-202ENST00000407144 VPS37BQ9H9H4 285 aa23.42■■□□□ 1.34
CUEDC1-202ENST00000407144 PMLP29590 882 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 CPOXP36551 454 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 TRIP10Q15642 601 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 CLPPQ16740 277 aaPredicted RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 ADGRD1Q6QNK2 874 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 MZB1Q8WU39 189 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 NSUN4Q96CB9 384 aaKnown RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 COX4I2Q96KJ9 171 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 SNX27Q96L92 541 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 DHRS4Q9BTZ2 278 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 CCDC106Q9BWC9 280 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 MRPL1Q9BYD6 325 aaKnown RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 DNALI1O14645 258 aaPredicted RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 P4HA2O15460 535 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 MARCH6O60337 910 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 DKC1O60832 514 aaKnown RBP eCLIP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 NKX1-1Q15270 411 aaPredicted RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 MAP7D1Q3KQU3 841 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 SPTY2D1Q68D10 685 aaPredicted RBP23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 ETNPPLQ8TBG4 499 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 SLC5A5Q92911 643 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 BTBD6Q96KE9 485 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 TCHPQ9BT92 498 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 SLC17A7Q9P2U7 560 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 SORCS3Q9UPU3 1222 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 DTNAQ9Y4J8 743 aa23.41■■□□□ 1.34
CUEDC1-202ENST00000407144 USP17L3A6NCW0 530 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 USP17L4A6NCW7 530 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 CLIC2O15247 247 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 ETV4P43268 484 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 HIRAP54198 1017 aaPredicted RBP23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 KLF1Q13351 362 aaPredicted RBP23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 CCNIQ14094 377 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 CBWD6Q4V339 395 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 CBWD3Q5JTY5 395 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 CBWD5Q5RIA9 395 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 C12orf60Q5U649 245 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 USP17L1Q7RTZ2 530 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 KSR1Q8IVT5 923 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 PIGSQ96S52 555 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 WWP1Q9H0M0 922 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 UBAP1Q9NZ09 502 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 RSL24D1Q9UHA3 163 aaKnown RBP23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 STRIP2Q9ULQ0 834 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 MAD1L1Q9Y6D9 718 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 MYO3BQ8WXR4 1341 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 FAM237BA0A1B0GVD1 139 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 TGFB1I1O43294 461 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 DNAJA2O60884 412 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 TSPY3P0CV98 308 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 TSPY8P0CW00 308 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 ERFP50548 548 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 KDSRQ06136 332 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 SLC26A7Q8TE54 656 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 NLRP4Q96MN2 994 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 PCDHB18PQ96TA0 734 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 MKNK2Q9HBH9 465 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 PPARGC1AQ9UBK2 798 aaKnown RBP23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 ATRNL1Q5VV63 1379 aa23.4■■□□□ 1.34
CUEDC1-202ENST00000407144 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.34
CUEDC1-202ENST00000407144 DCAF8L1A6NGE4 600 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 FBP2O00757 339 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 CDK9P50750 372 aaKnown RBP23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 MYL7Q01449 175 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 PDIA2Q13087 525 aaKnown RBP23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 GIPC3Q8TF64 312 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 REEP2Q9BRK0 252 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 OSBPL6Q9BZF3 934 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 CPVLQ9H3G5 476 aa23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 FAM32AQ9Y421 112 aaKnown RBP23.39■■□□□ 1.33
CUEDC1-202ENST00000407144 C2orf71A6NGG8 1288 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 BTKQ06187 659 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 CHRNDQ07001 517 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 POTEHQ6S545 545 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 PRPF39Q86UA1 669 aaKnown RBP23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 SCAIQ8N9R8 606 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 TRPC4APQ8TEL6 797 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 PYROXD1Q8WU10 500 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 C7orf26Q96N11 449 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 HERPUD2Q9BSE4 406 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 MCM9Q9NXL9 1143 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 CHORDC1Q9UHD1 332 aaPredicted RBP23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 ATP2A1O14983 1001 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 EIF3DO15371 548 aaKnown RBP eCLIP23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 NAA20P61599 178 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 PTP4A2Q12974 167 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 PGM2L1Q6PCE3 622 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 LMO3Q8TAP4 145 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 GCNAQ96QF7 691 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 PRDM16Q9HAZ2 1276 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 CNTN3Q9P232 1028 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 PPME1Q9Y570 386 aa23.38■■□□□ 1.33
CUEDC1-202ENST00000407144 FAM170AA1A519 330 aa23.37■■□□□ 1.33
CUEDC1-202ENST00000407144 H3BSA7 217 aa23.37■■□□□ 1.33
CUEDC1-202ENST00000407144 AOC1P19801 751 aa23.37■■□□□ 1.33
CUEDC1-202ENST00000407144 NUP107P57740 925 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms