RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ARL2P36404 184 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 SPDYCQ5MJ68 293 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 ZNF449Q6P9G9 518 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 FBF1Q8TES7 1133 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 MIS12Q9H081 205 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 GPRC5DQ9NZD1 345 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.4
PCNX4-204ENST00000406949 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 FSBPO95073 299 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 KRT7P08729 469 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
PCNX4-204ENST00000406949 MMP8P22894 467 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 CTCFP49711 727 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-204ENST00000406949 AP3M2P53677 418 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 EIF3EP60228 445 aaKnown RBP12.52□□□□□ -0.41
PCNX4-204ENST00000406949 FASTKD3Q14CZ7 662 aaKnown RBP12.52□□□□□ -0.41
PCNX4-204ENST00000406949 MPZL3Q6UWV2 235 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 PDIK1LQ8N165 341 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 CFAP36Q96G28 342 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.41
PCNX4-204ENST00000406949 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 EDN1P05305 212 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 ALDH3A1P30838 453 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 MSH2P43246 934 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 PHKA2P46019 1235 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 ARL4CP56559 192 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 ECT2Q9H8V3 914 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 MAD1L1Q9Y6D9 718 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 COL4A5P29400 1685 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 A0A087WZ62 844 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 UBOX5O94941 541 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 STBD1O95210 358 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 RPSAP08865 295 aaKnown RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 FAXCQ5TGI0 409 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 PLEKHA7Q6IQ23 1121 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 CYB5D1Q6P9G0 228 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 ZPBP2Q6X784 338 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 CYP4X1Q8N118 509 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 REPS2Q8NFH8 660 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 JOSD2Q8TAC2 188 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 VCPIP1Q96JH7 1222 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 ACO2Q99798 780 aaKnown RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 FDXACB1Q9BRP7 624 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 FAM47DPA6NHR8 397 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 LIASO43766 372 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 MAFO75444 373 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-204ENST00000406949 NFICP08651 508 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 RBP3P10745 1247 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 TXLNGYQ9BZA5 131 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 GPATCH2LQ9NWQ4 482 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 DCTN4Q9UJW0 460 aa12.51□□□□□ -0.41
PCNX4-204ENST00000406949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 PDGFRAP16234 1089 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 SSTR1P30872 391 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 SPRED3Q2MJR0 410 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 C3orf20Q8ND61 904 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 HESX1Q9UBX0 185 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 TMEM191CA6NGB0 347 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 ARIH2O95376 493 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 INHBAP08476 426 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 ZNF286BP0CG31 522 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 STAG3L1P0CL83 205 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 VCPP55072 806 aaKnown RBP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 AMHR2Q16671 573 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 C3orf62Q6ZUJ4 267 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 ATXN2LQ8WWM7 1075 aaKnown RBP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 FAF2Q96CS3 445 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 TMEM134Q9H6X4 195 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 MYO1EQ12965 1108 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
PCNX4-204ENST00000406949 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 OR6B3Q8NGW1 331 aa12.5□□□□□ -0.41
PCNX4-204ENST00000406949 TTC25Q96NG3 672 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms