RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
HMGB1-206ENST00000405805 ZBBXA8MT70 800 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 B2RBV5 119 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 DDHD2O94830 711 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 CYP3A4P08684 503 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 GZMAP12544 262 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 RAB27AP51159 221 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 TAS2R40P59535 323 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 CAV1Q03135 178 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 NCOA4Q13772 614 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 LGSNQ5TDP6 509 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 SESTD1Q86VW0 696 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 MCOLN2Q8IZK6 566 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 TTC8Q8TAM2 541 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 OLFM3Q96PB7 478 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 GLI3P10071 1580 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 SNED1Q8TER0 1413 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 CAPN9O14815 690 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 GHRP10912 638 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 RGS7P49802 495 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 CDH6P55285 790 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 WDR72Q3MJ13 1102 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 HYIQ5T013 277 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 FAM149B1Q96BN6 582 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 TLCD1Q96CP7 247 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 RAB6BQ9NRW1 208 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 CNOT7Q9UIV1 285 aaKnown RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 EIF3EP60228 445 aaKnown RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 TBL3Q12788 808 aaKnown RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 MTMR2Q13614 643 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 ALCAMQ13740 583 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 THOC5Q13769 683 aaKnown RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 C6orf89Q6UWU4 347 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 SLFN11Q7Z7L1 901 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 LRRC6Q86X45 466 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 ARID3BQ8IVW6 561 aaPredicted RBP12.5□□□□□ -0.41
HMGB1-206ENST00000405805 CCNYQ8ND76 341 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 PARVAQ9NVD7 372 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 STXBP5LQ9Y2K9 1186 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 KAT6AQ92794 2004 aa12.5□□□□□ -0.41
HMGB1-206ENST00000405805 DPPA5A6NC42 116 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 TNNC2P02585 160 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 RBP3P10745 1247 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 BAG6P46379 1132 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 SLC15A2Q16348 729 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 UGCGQ16739 394 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 FAM151AQ8WW52 585 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 CKAP2Q8WWK9 683 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 LENG9Q96B70 501 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
HMGB1-206ENST00000405805 WHRNQ9P202 907 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
HMGB1-206ENST00000405805 CORO1CQ9ULV4 474 aaPredicted RBP12.49□□□□□ -0.41
HMGB1-206ENST00000405805 INPP5FQ9Y2H2 1132 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 UBE4BO95155 1302 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 UBR2Q8IWV8 1755 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 BTNL10A8MVZ5 291 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ZBED1O96006 694 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 APOEP02649 317 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 KRT3P12035 628 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 GFAPP14136 432 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 PTGIRP43119 386 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 TNFAIP1Q13829 316 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 BMPR2Q13873 1038 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 MOXD1Q6UVY6 613 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 C17orf50Q8WW18 174 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ERLEC1Q96DZ1 483 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 FBXO40Q9UH90 709 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ANGPTL2Q9UKU9 493 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 CASZ1Q86V15 1759 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 PSAPP07602 524 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 VIL1P09327 827 aaKnown RBP12.49□□□□□ -0.41
HMGB1-206ENST00000405805 JAG1P78504 1218 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 DCLK2Q8N568 766 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 FBXO36Q8NEA4 188 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 FEZF2Q8TBJ5 459 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ATXN2LQ8WWM7 1075 aaKnown RBP12.49□□□□□ -0.41
HMGB1-206ENST00000405805 ART4Q93070 314 aa12.49□□□□□ -0.41
HMGB1-206ENST00000405805 Q9H521 79 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms