RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CST3P01034 146 aaPredicted RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 IFNB1P01574 187 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 KRT7P08729 469 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 TSHRP16473 764 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 CCNG1P51959 295 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 CLNS1AP54105 237 aaKnown RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ARL4CP56559 192 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF280AP59817 542 aaPredicted RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 OGDHQ02218 1023 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 STXBP2Q15833 593 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 KLHL38Q2WGJ6 581 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 DCAF15Q66K64 600 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 C4orf33Q8N1A6 199 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ATP11CQ8NB49 1132 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ALKBH8Q96BT7 664 aaKnown RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 NRBP2Q9NSY0 501 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 SCAF8Q9UPN6 1271 aaKnown RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 IGKV6D-21A0A0A0MT36 114 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 C19orf81C9J6K1 198 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 ATP2A2P16615 1042 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 SP2Q02086 613 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 HADHQ16836 314 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 DNERQ8NFT8 737 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 PYROXD1Q8WU10 500 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 MIEF2Q96C03 454 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 KIF9Q9HAQ2 790 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 TRIM33Q9UPN9 1127 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 C3orf70A6NLC5 250 aaPredicted RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 A8MUI8 341 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 HNRNPCL1O60812 293 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 TOM1L1O75674 476 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 BRD2P25440 801 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 EFNA5P52803 228 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 GPX6P59796 221 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 SLC1A5Q15758 541 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 DUOXA2Q1HG44 320 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 SLC45A4Q5BKX6 768 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 FYB2Q5VWT5 728 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 THNSL1Q8IYQ7 743 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 NAT8LQ8N9F0 302 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 C10orf82Q8WW14 230 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 MRPL4Q9BYD3 311 aaKnown RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 GRID1Q9ULK0 1009 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 ZMYND8Q9ULU4 1186 aaPredicted RBP11.29□□□□□ -0.6
CLIP4-204ENST00000404424 AGTPBP1Q9UPW5 1226 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
CLIP4-204ENST00000404424 PHIPQ8WWQ0 1821 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 E7ESA3 106 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 C2CD2LO14523 706 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 TRAFD1O14545 582 aaPredicted RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 TM9SF1O15321 606 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 EDN1P05305 212 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 KRT4P19013 534 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 MYL6P60660 151 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 TRPC3Q13507 836 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 CAPSQ13938 189 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 TARBP2Q15633 366 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 HP1BP3Q5SSJ5 553 aaPredicted RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 LVRNQ6Q4G3 990 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 BBS12Q6ZW61 710 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF75CPQ92670 426 aaPredicted RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 HAUS1Q96CS2 278 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 THOC1Q96FV9 657 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 DHRS4Q9BTZ2 278 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 MAK16Q9BXY0 300 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 PICK1Q9NRD5 415 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 DONSONQ9NYP3 566 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 RPL26L1Q9UNX3 145 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 RLFQ13129 1914 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 CLUHO75153 1309 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 A0A1W2PPM1 405 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 E7ENQ6 273 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 HGSO14964 777 aaPredicted RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 FAM189A1O60320 539 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 HARSP12081 509 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 PTPRAP18433 802 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 KCNA3P22001 575 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms