RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CALCAP01258 141 aa35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 SOX5P35711 763 aa35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 CREMQ03060 361 aa35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 TBX2Q13207 712 aaPredicted RBP35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 C12orf29Q8N999 325 aa35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 HEXIM2Q96MH2 286 aaKnown RBP35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 ACP6Q9NPH0 428 aa35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 LUC7L2Q9Y383 392 aaKnown RBP35.44■■■■□ 3.26
CSNK1E-204ENST00000403904 GFPT2O94808 682 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 CPB1P15086 417 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 CLCN1P35523 988 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 PTPROQ16827 1216 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 SLC39A12Q504Y0 691 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 ZNF397Q8NF99 534 aaPredicted RBP35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 MRPL38Q96DV4 380 aaKnown RBP35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 KLHL5Q96PQ7 755 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 EMILIN2Q9BXX0 1053 aa35.43■■■■□ 3.26
CSNK1E-204ENST00000403904 ROR1Q01973 937 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 MDH1BQ5I0G3 518 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 SPC24Q8NBT2 197 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 PKMYT1Q99640 499 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 TMLHEQ9NVH6 421 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 NDUFV1P49821 464 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 ZBED6P86452 979 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 GOLGA8FQ08AF8 430 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 GOLGA8DPQ0D2H9 430 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 FAM171BQ6P995 826 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 DCP1BQ8IZD4 617 aaKnown RBP35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 MYO6Q9UM54 1294 aa35.42■■■■□ 3.26
CSNK1E-204ENST00000403904 PAEPP09466 180 aa35.41■■■■□ 3.26
CSNK1E-204ENST00000403904 TPM1P09493 284 aa35.41■■■■□ 3.26
CSNK1E-204ENST00000403904 ARID5AQ03989 594 aa35.41■■■■□ 3.26
CSNK1E-204ENST00000403904 MYCBPAPQ8TBZ2 947 aa35.41■■■■□ 3.26
CSNK1E-204ENST00000403904 DNAI2Q9GZS0 605 aa35.41■■■■□ 3.26
CSNK1E-204ENST00000403904 FAM49BQ9NUQ9 324 aa35.41■■■■□ 3.26
CSNK1E-204ENST00000403904 WDR27A2RRH5 827 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 CD19P15391 556 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 KRT9P35527 623 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 GPR17Q13304 367 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 ADGRD2Q7Z7M1 963 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 SLC47A2Q86VL8 602 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 PALB2Q86YC2 1186 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 PGLYRP2Q96PD5 576 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 REV3LO60673 3130 aa35.4■■■■□ 3.26
CSNK1E-204ENST00000403904 ADH1AP07327 375 aa35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 KLRC2P26717 231 aa35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 ADKP55263 362 aaKnown RBP35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 RAB33AQ14088 237 aa35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 SMYD5Q6GMV2 418 aa35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 RNF19BQ6ZMZ0 732 aa35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 PCED1BQ96HM7 432 aa35.39■■■■□ 3.26
CSNK1E-204ENST00000403904 PTK2Q05397 1052 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 SFMBT2Q5VUG0 894 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 E4F1Q66K89 784 aaPredicted RBP35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 RBM23Q86U06 439 aaKnown RBP35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 TFAP2BQ92481 460 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 PER2O15055 1255 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 CCDC130P13994 396 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 GNA15P30679 374 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 CYP27A1Q02318 531 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 MYLPFQ96A32 169 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 CYFIP2Q96F07 1278 aa35.38■■■■□ 3.25
CSNK1E-204ENST00000403904 MFAP3LO75121 409 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 VDRP11473 427 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 BRD2P25440 801 aaKnown RBP35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 MAPRE1Q15691 268 aaKnown RBP35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 SGO2Q562F6 1265 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 PPP1R26Q5T8A7 1209 aaPredicted RBP35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 Q7L0L9 218 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 ZNF461Q8TAF7 563 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 ZSWIM1Q9BR11 485 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 B3GNT5Q9BYG0 378 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 AIPL1Q9NZN9 384 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 KIAA1257Q9ULG3 409 aa35.37■■■■□ 3.25
CSNK1E-204ENST00000403904 PLXNA3P51805 1871 aa35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 AKR1B15C9JRZ8 316 aaPredicted RBP35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 BPIFB4P59827 614 aa35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 ADGRE1Q14246 886 aa35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 NFE2Q16621 373 aaPredicted RBP35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 IRF2BP2Q7Z5L9 587 aa35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 SLC2A14Q8TDB8 520 aa35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 ANP32BQ92688 251 aaKnown RBP35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 NUCKS1Q9H1E3 243 aaKnown RBP35.36■■■■□ 3.25
CSNK1E-204ENST00000403904 MTMR11A4FU01 709 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 CLDN5O00501 218 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 ABLIM3O94929 683 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 CYP11B1P15538 503 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 FERP16591 822 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 GPR153Q6NV75 609 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 FUKQ8N0W3 1084 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 ATAD1Q8NBU5 361 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 TLE6Q9H808 572 aa35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 ABI2Q9NYB9 513 aaPredicted RBP35.35■■■■□ 3.25
CSNK1E-204ENST00000403904 THAP12O43422 761 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 TGM5O43548 720 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 CLASP2O75122 1294 aaKnown RBP35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 VNN2O95498 520 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 ADCY1Q08828 1119 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 ASIC2Q16515 512 aa35.34■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms