RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CMTM8Q8IZV2 173 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 FAM177A1Q8N128 213 aaPredicted RBP10.11□□□□□ -0.79
NUP43-204ENST00000403890 PNPLA1Q8N8W4 532 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ATAD1Q8NBU5 361 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 MDGA1Q8NFP4 955 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 OLIG1Q8TAK6 271 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 CEP76Q8TAP6 659 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 BSNDQ8WZ55 320 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 EZH1Q92800 747 aaPredicted RBP10.11□□□□□ -0.79
NUP43-204ENST00000403890 CD101Q93033 1021 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ZMAT2Q96NC0 199 aaKnown RBP10.11□□□□□ -0.79
NUP43-204ENST00000403890 FNBP1Q96RU3 617 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 NAP1L4Q99733 375 aaKnown RBP10.11□□□□□ -0.79
NUP43-204ENST00000403890 TDP1Q9NUW8 608 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 PILRBQ9UKJ0 227 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 TRIP11Q15643 1979 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 ARID2Q68CP9 1835 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 UNC79Q9P2D8 2635 aa10.11□□□□□ -0.79
NUP43-204ENST00000403890 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 A0A087WV48 116 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 OR6C75A6NL08 312 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 SH3BP5O60239 455 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 SOAT2O75908 522 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 C1QL1O75973 258 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 ALDH1A2O94788 518 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 SERPINF2P08697 491 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 AVPR1AP37288 418 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 P2RY2P41231 377 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 NAMPTP43490 491 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 EFNA5P52803 228 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 OSTNP61366 133 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 SSRP1Q08945 709 aaKnown RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 NT5DC1Q5TFE4 455 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 PEAR1Q5VY43 1037 aaPredicted RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 LYSMD4Q5XG99 296 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 LMBRD2Q68DH5 695 aaPredicted RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 USP37Q86T82 979 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 TTC30AQ86WT1 665 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 CPA6Q8N4T0 437 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 USP33Q8TEY7 942 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 RLN3Q8WXF3 142 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 USP13Q92995 863 aaPredicted RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 C18orf25Q96B23 403 aaPredicted RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 SPACA7Q96KW9 195 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 CAMK1GQ96NX5 476 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 NACC1Q96RE7 527 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 ECT2Q9H8V3 914 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 FSCN3Q9NQT6 498 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 PCDHA12Q9UN75 941 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 APOBEC2Q9Y235 224 aaKnown RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 CCL26Q9Y258 94 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 TIMM13Q9Y5L4 95 aaPredicted RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 RAI2Q9Y5P3 530 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 NUP210Q8TEM1 1887 aaPredicted RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 CFAP46Q8IYW2 2715 aa10.1□□□□□ -0.79
NUP43-204ENST00000403890 GOLGA4Q13439 2230 aaKnown RBP10.1□□□□□ -0.79
NUP43-204ENST00000403890 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 M0QZQ0 153 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 ATXN7O15265 892 aaPredicted RBP10.09□□□□□ -0.79
NUP43-204ENST00000403890 CPA1P15085 419 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 ITPKAP23677 461 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
NUP43-204ENST00000403890 SLC14A1Q13336 389 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 BYSLQ13895 437 aaKnown RBP10.09□□□□□ -0.79
NUP43-204ENST00000403890 VEPH1Q14D04 833 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 PPP2R5AQ15172 486 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 TAF12Q16514 161 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 CRY1Q16526 586 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 C2orf27AQ580R0 203 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 RABEPKQ7Z6M1 372 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 MINDY1Q8N5J2 469 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 TTC9BQ8N6N2 239 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 MAB21L3Q8N8X9 362 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 CEP120Q8N960 986 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 ACAP3Q96P50 834 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 KIF9Q9HAQ2 790 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 CAPN10Q9HC96 672 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 NCOA5Q9HCD5 579 aaKnown RBP10.09□□□□□ -0.79
NUP43-204ENST00000403890 DNAAF2Q9NVR5 837 aaKnown RBP10.09□□□□□ -0.79
NUP43-204ENST00000403890 CNTN3Q9P232 1028 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 HSFX1Q9UBD0 423 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 MMP17Q9ULZ9 603 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 TNFSF13BQ9Y275 285 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 PLXNB3Q9ULL4 1909 aa10.09□□□□□ -0.79
NUP43-204ENST00000403890 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
NUP43-204ENST00000403890 MTMR11A4FU01 709 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 K7ERI5 159 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 DEXIO95424 95 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 DDX6P26196 483 aaKnown RBP eCLIP10.08□□□□□ -0.8
NUP43-204ENST00000403890 HSPA4P34932 840 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 TUFMP49411 452 aaKnown RBP10.08□□□□□ -0.8
NUP43-204ENST00000403890 PRR20EP86478 221 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 PRR20CP86479 221 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 PRR20DP86480 221 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 PRR20BP86481 221 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 PRR20AP86496 221 aa10.08□□□□□ -0.8
NUP43-204ENST00000403890 CYP4F3Q08477 520 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms