RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	AURKA	O14965	403 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	PRC1	O43663	620 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	PLEKHA8P1	O95397	391 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	FOS	P01100	380 aa	Predicted RBP	7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	GSTM1	P09488	218 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	FGFR1	P11362	822 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	TMOD1	P28289	359 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MCM5	P33992	734 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	GDNF	P39905	211 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ADCY7	P51828	1080 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	RBM10	P98175	930 aa	Known RBP	7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	DUSP4	Q13115	394 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	GIT2	Q14161	759 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	DPY19L1	Q2PZI1	675 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ATAT1	Q5SQI0	421 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	FAM102B	Q5T8I3	360 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	GTF2IRD2B	Q6EKJ0	949 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	SYCE2	Q6PIF2	218 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	KCNT2	Q6UVM3	1135 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	SPATC1	Q76KD6	591 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	GTF2IRD2	Q86UP8	949 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	METTL13	Q8N6R0	699 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	RNF169	Q8NCN4	708 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	IGDCC4	Q8TDY8	1250 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	RSPH1	Q8WYR4	309 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	TMEM169	Q96HH4	297 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	SCLT1	Q96NL6	688 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MCMBP	Q9BTE3	642 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	CDADC1	Q9BWV3	514 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MRPL9	Q9BYD2	267 aa	Known RBP	7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	LY9	Q9HBG7	655 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ZNF302	Q9NR11	478 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	AP5S1	Q9NUS5	200 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	SPG21	Q9NZD8	308 aa		7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	DBR1	Q9UK59	544 aa	Known RBP	7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	GPR55	Q9Y2T6	319 aa	Predicted RBP	7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	NOC2L	Q9Y3T9	749 aa	Known RBP	7.6	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MICAL3	Q7RTP6	2002 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	PTPRS	Q13332	1948 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	PRR23A	A6NEV1	266 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	SH2B2	O14492	632 aa	Predicted RBP	7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MAGEB2	O15479	319 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	TBX1	O43435	398 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MGEA5	O60502	916 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	CAPNS1	P04632	268 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ZGLP1	P0C6A0	271 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	NBL1	P41271	181 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ALDH7A1	P49419	539 aa	Known RBP	7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	NAPA	P54920	295 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	FAM189B	P81408	668 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	KIZ	Q2M2Z5	673 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	TTC22	Q5TAA0	569 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ZPBP2	Q6X784	338 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	TMTC3	Q6ZXV5	915 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MB21D2	Q8IYB1	491 aa	Predicted RBP	7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	KIAA0319L	Q8IZA0	1049 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	SRBD1	Q8N5C6	995 aa	Known RBP	7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MRPL43	Q8N983	215 aa	Known RBP	7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	MRFAP1L1	Q96HT8	127 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	FAM167A	Q96KS9	214 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	PPP1R16B	Q96T49	567 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	G6PC3	Q9BUM1	346 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	CWH43	Q9H720	699 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	AGO4	Q9HCK5	861 aa	Known RBP	7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	CYP26B1	Q9NR63	512 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	STK39	Q9UEW8	545 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	HCFC2	Q9Y5Z7	792 aa		7.59	□□□□□ -1.19
CEACAM1-208	ENST00000403461	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	C2orf71	A6NGG8	1288 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	HIDE1	A8MVS5	230 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	C2CD4D	B7Z1M9	353 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	hCG_1984214	I3L0E3	225 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	DDX39A	O00148	427 aa	Known RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	PDGFB	P01127	241 aa	Predicted RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	IFNGR1	P15260	489 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	RXRA	P19793	462 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	CHML	P26374	656 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	HOXC12	P31275	282 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	LIFR	P42702	1097 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	ID4	P47928	161 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	CLCN5	P51795	746 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	ANTXR2	P58335	489 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	PPP2R2A	P63151	447 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	SET	Q01105	290 aa	Predicted RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	PTH1R	Q03431	593 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	SSRP1	Q08945	709 aa	Known RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	ITGB3BP	Q13352	177 aa	Predicted RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	FZD5	Q13467	585 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	KCNC3	Q14003	757 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	EEF1DP3	Q658K8	133 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	SWSAP1	Q6NVH7	229 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	CBLL1	Q75N03	491 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	NIPA1	Q7RTP0	329 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	ASCL5	Q7RTU5	278 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	CABP7	Q86V35	215 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	FAM228A	Q86W67	206 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	MICU3	Q86XE3	530 aa		7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	SMAP1	Q8IYB5	467 aa	Predicted RBP	7.58	□□□□□ -1.2
CEACAM1-208	ENST00000403461	ZDHHC14	Q8IZN3	488 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms