RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 EXTL3O43909 919 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 RPP40O75818 363 aaKnown RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 HAPLN1P10915 354 aaPredicted RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 PNPLA4P41247 253 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 CDR1P51861 262 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 GTF2BQ00403 316 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 TSPY1Q01534 308 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 E2F4Q16254 413 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 AASDHQ4L235 1098 aaPredicted RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 CACNA2D4Q7Z3S7 1137 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 GAB3Q8WWW8 586 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 LOXL4Q96JB6 756 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 SLC46A2Q9BY10 475 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 KIF9Q9HAQ2 790 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
PRAME-204ENST00000403441 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 RALGAPA1Q6GYQ0 2036 aa13.3□□□□□ -0.28
PRAME-204ENST00000403441 ANK1P16157 1881 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 KPNA7A9QM74 516 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 ANKRD63C9JTQ0 380 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 GDF9O60383 454 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 CUTAO60888 179 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 IL18RAPO95256 599 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 NLRP12P59046 1061 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 RUNX3Q13761 415 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 STK38Q15208 465 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 ZC2HC1CQ53FD0 456 aaPredicted RBP13.29□□□□□ -0.28
PRAME-204ENST00000403441 TMEM196Q5HYL7 178 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 SHC4Q6S5L8 630 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 POMGNT1Q8WZA1 660 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 MRPS31Q92665 395 aaKnown RBP13.29□□□□□ -0.28
PRAME-204ENST00000403441 HVCN1Q96D96 273 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 ST6GALNAC4Q9H4F1 302 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 TDP1Q9NUW8 608 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 RCOR1Q9UKL0 485 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 STYXL1Q9Y6J8 313 aa13.29□□□□□ -0.28
PRAME-204ENST00000403441 KIF26AQ9ULI4 1882 aaPredicted RBP13.29□□□□□ -0.28
PRAME-204ENST00000403441 MAP1BP46821 2468 aaKnown RBP13.29□□□□□ -0.28
PRAME-204ENST00000403441 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 SOBPA7XYQ1 873 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 TISP43B9A030 160 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
PRAME-204ENST00000403441 AXIN1O15169 862 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 KRT37O76014 449 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 TXLNAP40222 546 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 LIMK1P53667 647 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 DNM1Q05193 864 aaKnown RBP13.28□□□□□ -0.28
PRAME-204ENST00000403441 POSTNQ15063 836 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 NFE2Q16621 373 aaPredicted RBP13.28□□□□□ -0.28
PRAME-204ENST00000403441 ST3GAL2Q16842 350 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 FSTL4Q6MZW2 842 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 CCDC73Q6ZRK6 1079 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 NT5DC4Q86YG4 428 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
PRAME-204ENST00000403441 FAM83CQ9BQN1 747 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 STRA6Q9BX79 667 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 UXTQ9UBK9 157 aaPredicted RBP13.28□□□□□ -0.28
PRAME-204ENST00000403441 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
PRAME-204ENST00000403441 CCL26Q9Y258 94 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 SCN1AP35498 2009 aa13.28□□□□□ -0.28
PRAME-204ENST00000403441 CNOT1A5YKK6 2376 aaKnown RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 PRPF40AO75400 957 aaKnown RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 PPP1R37O75864 691 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 AKAP3O75969 853 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 EPN2O95208 641 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 CSH1P0DML2 217 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 CSH2P0DML3 217 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 HMGA1P17096 107 aaKnown RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 PXNP49023 591 aaPredicted RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 RPL10AP62906 217 aaKnown RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 BECN1Q14457 450 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 SF3A2Q15428 464 aaKnown RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
PRAME-204ENST00000403441 RRAGBQ5VZM2 374 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 TXNDC8Q6A555 127 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 CNNM4Q6P4Q7 775 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 PKN3Q6P5Z2 889 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 TMEM150AQ86TG1 271 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 MON1AQ86VX9 555 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 EFCAB13Q8IY85 973 aa13.27□□□□□ -0.29
PRAME-204ENST00000403441 CPA6Q8N4T0 437 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms