RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CDH8P55286 799 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 MARSP56192 900 aaKnown RBP20.52■□□□□ 0.88
RTN4-207ENST00000402434 MAPRE1Q15691 268 aaKnown RBP20.52■□□□□ 0.88
RTN4-207ENST00000402434 SLC5A9Q2M3M2 681 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 MGAT5BQ3V5L5 792 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 PRSS36Q5K4E3 855 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 TCERG1LQ5VWI1 586 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 RBM43Q6ZSC3 357 aaKnown RBP20.52■□□□□ 0.88
RTN4-207ENST00000402434 GET4Q7L5D6 327 aaPredicted RBP20.52■□□□□ 0.88
RTN4-207ENST00000402434 LEMD2Q8NC56 503 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 FBXL13Q8NEE6 735 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 ITFG1Q8TB96 612 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 FGF13Q92913 245 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 PI4K2AQ9BTU6 479 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 LRRC3Q9BY71 257 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 IMPG2Q9BZV3 1241 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 MMRN2Q9H8L6 949 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 MUTYHQ9UIF7 546 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 CDH7Q9ULB5 785 aa20.52■□□□□ 0.88
RTN4-207ENST00000402434 MICAL2O94851 1124 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 GNA14O95837 355 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 ATF6P18850 670 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 ASPAP45381 313 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 NOP14P78316 857 aaKnown RBP20.51■□□□□ 0.87
RTN4-207ENST00000402434 CCDC142Q17RM4 750 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 CBWD6Q4V339 395 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 DCAF17Q5H9S7 520 aaPredicted RBP20.51■□□□□ 0.87
RTN4-207ENST00000402434 CBWD3Q5JTY5 395 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 CBWD5Q5RIA9 395 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 CYP4A22Q5TCH4 519 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 SPOPLQ6IQ16 392 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 SEMA4DQ92854 862 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 PSMG2Q969U7 264 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 FAXDC2Q96IV6 333 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 SEPT5Q99719 369 aaPredicted RBP20.51■□□□□ 0.87
RTN4-207ENST00000402434 SRRTQ9BXP5 876 aaKnown RBP20.51■□□□□ 0.87
RTN4-207ENST00000402434 BCO2Q9BYV7 579 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 SDCBP2Q9H190 292 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 RAB20Q9NX57 234 aa20.51■□□□□ 0.87
RTN4-207ENST00000402434 MRPS23Q9Y3D9 190 aaKnown RBP20.51■□□□□ 0.87
RTN4-207ENST00000402434 ZNF197O14709 1029 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 PMM2O15305 246 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 LRRN2O75325 713 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 MBD3O95983 291 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 PTPN1P18031 435 aaKnown RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 CCR2P41597 374 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 PSMC1P62191 440 aaKnown RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 PTPN21Q16825 1174 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 CCDC40Q4G0X9 1142 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 C4orf50Q6ZRC1 276 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 DNAJB7Q7Z6W7 309 aaPredicted RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 HS6ST3Q8IZP7 471 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 MYCBPAPQ8TBZ2 947 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 EPHX3Q9H6B9 360 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 APOBEC3GQ9HC16 384 aaKnown RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 A8MXQ7 604 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 FGFR1OPO95684 399 aaKnown RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 CYP2F1P24903 491 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 RAP1GAPP47736 663 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 NLRP12P59046 1061 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 PDZD4Q76G19 769 aaPredicted RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 ITIH5Q86UX2 942 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 TMC8Q8IU68 726 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 SPATA2LQ8IUW3 424 aaPredicted RBP20.5■□□□□ 0.87
RTN4-207ENST00000402434 TRIM59Q8IWR1 403 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 NPAS3Q8IXF0 933 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 CCDC150Q8NCX0 1101 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 NIF3L1Q9GZT8 377 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 KCNK12Q9HB15 430 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 CYP3A43Q9HB55 503 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 ASAH2Q9NR71 780 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 GDE1Q9NZC3 331 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 IGSF9Q9P2J2 1179 aa20.5■□□□□ 0.87
RTN4-207ENST00000402434 TRIOO75962 3097 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 CLSTN1O94985 981 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 MAGEA11P43364 429 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 VEPH1Q14D04 833 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 B3GALNT2Q8NCR0 500 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 NXPE3Q969Y0 559 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 MYLPFQ96A32 169 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 TCEAL4Q96EI5 215 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 PCED1BQ96HM7 432 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 LPIN3Q9BQK8 851 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 DPEP3Q9H4B8 488 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 MAGEC2Q9UBF1 373 aaPredicted RBP20.49■□□□□ 0.87
RTN4-207ENST00000402434 SORCS3Q9UPU3 1222 aa20.49■□□□□ 0.87
RTN4-207ENST00000402434 ANHXE9PGG2 379 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 NRG2O14511 850 aaPredicted RBP20.48■□□□□ 0.87
RTN4-207ENST00000402434 MOSPD3O75425 235 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 ASGR2P07307 311 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 ERCC5P28715 1186 aaPredicted RBP20.48■□□□□ 0.87
RTN4-207ENST00000402434 FMO5P49326 533 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 RPL10AP62906 217 aaKnown RBP20.48■□□□□ 0.87
RTN4-207ENST00000402434 INCA1Q0VD86 236 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 MDH1BQ5I0G3 518 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 CT47A1Q5JQC4 288 aaPredicted RBP20.48■□□□□ 0.87
RTN4-207ENST00000402434 POTEHQ6S545 545 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 VSTM1Q6UX27 236 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms