RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 TOM1L1O75674 476 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 ASS1P00966 412 aaKnown RBP11.68□□□□□ -0.54
SCFD2-202ENST00000401642 PAEPP09466 180 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 TBXAS1P24557 533 aaPredicted RBP11.68□□□□□ -0.54
SCFD2-202ENST00000401642 FOXN2P32314 431 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 KLF1Q13351 362 aaPredicted RBP11.68□□□□□ -0.54
SCFD2-202ENST00000401642 TFDP1Q14186 410 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 SNCBQ16143 134 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 ATF7IP2Q5U623 682 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 XRRA1Q6P2D8 792 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 C12orf29Q8N999 325 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 C12orf50Q8NA57 414 aaPredicted RBP11.68□□□□□ -0.54
SCFD2-202ENST00000401642 EXD1Q8NHP7 514 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 TXNRD2Q9NNW7 524 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
SCFD2-202ENST00000401642 RBBP6Q7Z6E9 1792 aaKnown RBP11.68□□□□□ -0.54
SCFD2-202ENST00000401642 TCRBV7S3A2A0A539 114 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 PSTPIP1O43586 416 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 SNX3O60493 162 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 AVILO75366 819 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 C15orf59Q2T9L4 293 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 KIAA0319LQ8IZA0 1049 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 CPXM1Q96SM3 734 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 TRABDQ9H4I3 376 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 USP15Q9Y4E8 981 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 NR2E3Q9Y5X4 410 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 PMM2O15305 246 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 MSCO60682 206 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 NEBLO76041 1014 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 TXNP10599 105 aaKnown RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 RPA3P35244 121 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 CTCFP49711 727 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 PTP4A2Q12974 167 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 FAM102AQ5T9C2 384 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 ZNF677Q86XU0 584 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 KLHL29Q96CT2 875 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 ACO2Q99798 780 aaKnown RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 FAM49BQ9NUQ9 324 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 CHMP2BQ9UQN3 213 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 SYNJ2BP-COX16A0A087WUM0 186 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 C5orf60A6NFR6 353 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 OGTO15294 1046 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 CDH16O75309 829 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 SUN1O94901 812 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 IQCF3P0C7M6 154 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 ZNF667Q5HYK9 610 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 GLRA4Q5JXX5 417 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 OR6B2Q6IFH4 312 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 PHF13Q86YI8 300 aaPredicted RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 RCOR2Q8IZ40 523 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 C7orf31Q8N865 590 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 TMEM237Q96Q45 408 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 MIS12Q9H081 205 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 RPF1Q9H9Y2 349 aaKnown RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 NGRNQ9NPE2 291 aaKnown RBP11.67□□□□□ -0.54
SCFD2-202ENST00000401642 COX16Q9P0S2 106 aa11.67□□□□□ -0.54
SCFD2-202ENST00000401642 NFASCO94856 1347 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 A0A087WZ62 844 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 IGF2BP3O00425 579 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 CDC25CP30307 473 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 MSS51Q4VC12 460 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 PPP6R3Q5H9R7 873 aaPredicted RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 HHATQ5VTY9 493 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 NAIF1Q69YI7 327 aaPredicted RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 YTHDF3Q7Z739 585 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 SESTD1Q86VW0 696 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 VSIG1Q86XK7 387 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 UNC45BQ8IWX7 931 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 CTAGE3PQ8IX95 158 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 PALM2Q8IXS6 379 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 RBM41Q96IZ5 413 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 PIWIL1Q96J94 861 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 FDXACB1Q9BRP7 624 aaPredicted RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 PIH1D1Q9NWS0 290 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 CYP2C8P10632 490 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 KRT4P19013 534 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 RPS12P25398 132 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 ATP5DP30049 168 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 MAN1A1P33908 653 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
SCFD2-202ENST00000401642 GHRHRQ02643 423 aa11.66□□□□□ -0.54
SCFD2-202ENST00000401642 NEDD9Q14511 834 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms