RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TOP6BLQ8N6T0 577 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 ERBB2P04626 1255 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 PFKMP08237 780 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 LMO2P25791 158 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 GSCP56915 257 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-205ENST00000401607 RTN4RL1Q86UN2 441 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-205ENST00000401607 PGBD4Q96DM1 585 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 LRRC1Q9BTT6 524 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 FAM49BQ9NUQ9 324 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 HUS1O60921 280 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 SKIP12755 728 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 IBSPP21815 317 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-205ENST00000401607 GNL1P36915 607 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-205ENST00000401607 CLCNKBP51801 687 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 PKDCCQ504Y2 493 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 AADACL2Q6P093 401 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 OSTM1Q86WC4 334 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 ADGRF2Q8IZF7 708 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 C18orf8Q96DM3 657 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 MCEEQ96PE7 176 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 LPIN3Q9BQK8 851 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 SEZ6LQ9BYH1 1024 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 RGS18Q9NS28 235 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 ARGLU1Q9NWB6 273 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-205ENST00000401607 OGDHLQ9ULD0 1010 aa27.12■■□□□ 1.93
CPNE1-205ENST00000401607 TARSL2A2RTX5 802 aaKnown RBP27.11■■□□□ 1.93
CPNE1-205ENST00000401607 PODXLO00592 558 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 CCL5P13501 91 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 WARSP23381 471 aaKnown RBP27.11■■□□□ 1.93
CPNE1-205ENST00000401607 GABRB2P47870 512 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 VSNL1P62760 191 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 ZNF252P-AS1Q0IIN9 211 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 ARHGAP17Q68EM7 881 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 TTC30AQ86WT1 665 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 XYLT1Q86Y38 959 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 CRYBG2Q8N1P7 616 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 LINC01599Q8WXQ3 324 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 SNX25Q9H3E2 840 aa27.11■■□□□ 1.93
CPNE1-205ENST00000401607 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.11■■□□□ 1.93
CPNE1-205ENST00000401607 FGGP02679 453 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 PDGFRBP09619 1106 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 MAN1A1P33908 653 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 OGDHQ02218 1023 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 DAB2IPQ5VWQ8 1189 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 LRRC8DQ7L1W4 858 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 C3orf58Q8NDZ4 430 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 AP1M1Q9BXS5 423 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 IP6K2Q9UHH9 426 aa27.1■■□□□ 1.93
CPNE1-205ENST00000401607 C9IYK1 514 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 CYB561D2O14569 222 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 PSMC1P62191 440 aaKnown RBP27.09■■□□□ 1.93
CPNE1-205ENST00000401607 TAP1Q03518 808 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 WDR93Q6P2C0 686 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-205ENST00000401607 HDAC7Q8WUI4 952 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 PAAF1Q9BRP4 392 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 RNF208Q9H0X6 261 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 UBN1Q9NPG3 1134 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 WBP1LQ9NX94 342 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 CASTOR2A6NHX0 329 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 GOLGA8SH3BPF8 625 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 POMCP01189 267 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 PYGMP11217 842 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 SELPP16109 830 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 RPL9P32969 192 aaKnown RBP27.09■■□□□ 1.93
CPNE1-205ENST00000401607 RWDD2BP57060 319 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 MRPS25P82663 173 aaKnown RBP27.09■■□□□ 1.93
CPNE1-205ENST00000401607 BRD3Q15059 726 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 WDR35Q9P2L0 1181 aa27.09■■□□□ 1.93
CPNE1-205ENST00000401607 CCDC151A5D8V7 595 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 GRIK3Q13003 919 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 ZNF268Q14587 947 aaPredicted RBP27.08■■□□□ 1.93
CPNE1-205ENST00000401607 UPP1Q16831 310 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 LONRF2Q1L5Z9 754 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 DCUN1D2Q6PH85 259 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 SENP8Q96LD8 212 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 KRT12Q99456 494 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 SYNCQ9H7C4 482 aa27.08■■□□□ 1.93
CPNE1-205ENST00000401607 SIGLEC16A6NMB1 481 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 KRIT1O00522 736 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 INPPL1O15357 1258 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 TUBBP07437 444 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 FAM163BP0C2L3 166 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 TAS2R40P59535 323 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 WSCD1Q658N2 575 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 CCDC70Q6NSX1 233 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 C8orf74Q6P047 294 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 MCRS1Q96EZ8 462 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 DMGDHQ9UI17 866 aaKnown RBP27.07■■□□□ 1.92
CPNE1-205ENST00000401607 TULP2O00295 520 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 GABRDO14764 452 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 CCDC130P13994 396 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 GPNMBQ14956 572 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 SEL1L2Q5TEA6 688 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 JOSD2Q8TAC2 188 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 DDX27Q96GQ7 796 aaKnown RBP27.07■■□□□ 1.92
CPNE1-205ENST00000401607 ZNF446Q9NWS9 450 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 INPP5FQ9Y2H2 1132 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 NR2E1Q9Y466 385 aa27.07■■□□□ 1.92
CPNE1-205ENST00000401607 TDRD15B5MCY1 1934 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms