RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 WEE2P0C1S8 567 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 CUL2Q13617 745 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 HIF1AQ16665 826 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 FOXB2Q5VYV0 432 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 CES4AQ5XG92 561 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 PLEKHA7Q6IQ23 1121 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 UNC45BQ8IWX7 931 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 ZNF606Q8WXB4 792 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 VTI1AQ96AJ9 217 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 PSMC3IPQ9P2W1 217 aaPredicted RBP22.06■■□□□ 1.12
CTCF-202ENST00000401394 FZD1Q9UP38 647 aa22.06■■□□□ 1.12
CTCF-202ENST00000401394 SLX4Q8IY92 1834 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 NEK3P51956 506 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 OTUD4Q01804 1114 aaKnown RBP22.05■■□□□ 1.12
CTCF-202ENST00000401394 ZBTB16Q05516 673 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 OASLQ15646 514 aaKnown RBP22.05■■□□□ 1.12
CTCF-202ENST00000401394 LIN9Q5TKA1 542 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 DCUN1D2Q6PH85 259 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 TARS2Q9BW92 718 aaKnown RBP22.05■■□□□ 1.12
CTCF-202ENST00000401394 TMEM120AQ9BXJ8 343 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 A0A1B0GVG6 124 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 GSC2O15499 205 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 LIG4P49917 911 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 ZACNQ401N2 412 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 C15orf39Q6ZRI6 1047 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 ZC3H18Q86VM9 953 aaKnown RBP22.05■■□□□ 1.12
CTCF-202ENST00000401394 C4orf19Q8IY42 314 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 CCDC33Q8N5R6 958 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 SENP7Q9BQF6 1050 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 MANSC1Q9H8J5 431 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 TAS2R1Q9NYW7 299 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 EXOC7Q9UPT5 735 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 CENPFP49454 3210 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 CLGNO14967 610 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 WFS1O76024 890 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 ABHD2P08910 425 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 TNFSF9P41273 254 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 GEMIN4P57678 1058 aaKnown RBP22.05■■□□□ 1.12
CTCF-202ENST00000401394 NPNTQ6UXI9 565 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 CCNJLQ8IV13 435 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 FAM71DQ8N9W8 422 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 TMC2Q8TDI7 906 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 INPP5DQ92835 1189 aa22.05■■□□□ 1.12
CTCF-202ENST00000401394 CYB561D2O14569 222 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 NVLO15381 856 aaKnown RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 GYG2O15488 501 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 UBTFL6P0CB48 400 aaPredicted RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 FAXCQ5TGI0 409 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 ISLR2Q6UXK2 745 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 CENPUQ71F23 418 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 RELL1Q8IUW5 271 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.04■■□□□ 1.12
CTCF-202ENST00000401394 ARFGAP1Q8N6T3 406 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 ZNF333Q96JL9 665 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 POLR3FQ9H1D9 316 aaPredicted RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 hCG_1818297A0A087WSY0 165 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 PMM2O15305 246 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 ICAM1P05362 532 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 VCPP55072 806 aaKnown RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 BASP1P80723 227 aaKnown RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 SGSM1Q2NKQ1 1148 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 PRPF39Q86UA1 669 aaKnown RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 CCDC60Q8IWA6 550 aaPredicted RBP22.04■■□□□ 1.12
CTCF-202ENST00000401394 NMUR2Q9GZQ4 415 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 ST6GALNAC4Q9H4F1 302 aa22.04■■□□□ 1.12
CTCF-202ENST00000401394 C2CD2LO14523 706 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 CST8O60676 142 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 PEX10O60683 326 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 USP1O94782 785 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 SP100P23497 879 aaPredicted RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 ALDH1B1P30837 517 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 FAAP100Q0VG06 881 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 THOC5Q13769 683 aaKnown RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 CDR2LQ86X02 465 aaPredicted RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 JOSD2Q8TAC2 188 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 TFAP2BQ92481 460 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 SMG5Q9UPR3 1016 aaKnown RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 MYH9P35579 1960 aaKnown RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 TMEM191CA6NGB0 347 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 SIGLEC16A6NMB1 481 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 UGT1A9O60656 530 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 TMEM191BP0C7N4 346 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 ZCCHC18P0CG32 403 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 PYGBP11216 843 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 RPL22P35268 128 aaKnown RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 CDKN2BP42772 138 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 PTGER2P43116 358 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 HSF5Q4G112 596 aaPredicted RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.03■■□□□ 1.12
CTCF-202ENST00000401394 ENDOVQ8N8Q3 282 aaKnown RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 BBOF1Q8ND07 529 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 MZB1Q8WU39 189 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 TEKT4Q8WW24 435 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 UGT1A7Q9HAW7 530 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 UGT1A10Q9HAW8 530 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 UGT1A8Q9HAW9 530 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 SPATS2LQ9NUQ6 558 aaKnown RBP22.03■■□□□ 1.12
CTCF-202ENST00000401394 ZNRF3Q9ULT6 936 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
CTCF-202ENST00000401394 ENTPD3O75355 529 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms