RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 ROBO3Q96MS0 1386 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 USP17L12C9JPN9 530 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 USP17L21D6R901 530 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 SLC16A3O15427 465 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 TBC1D12O60347 775 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CCNT2O60583 730 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 RBP3P10745 1247 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 EIF2B2P49770 351 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 MECOMQ03112 1051 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CNGA3Q16281 694 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 KNOP1Q1ED39 458 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 ANKDD1AQ495B1 522 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CNBD2Q96M20 576 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 SLC17A7Q9P2U7 560 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 PCDHGB4Q9UN71 923 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 PCDHGB5Q9Y5G0 923 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 SPO11Q9Y5K1 396 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 IPO5O00410 1097 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 FAM58BPP0C7Q3 252 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 ALDH1A3P47895 512 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CREB5Q02930 508 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CAMK2BQ13554 666 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 LPCAT2Q7L5N7 544 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CHSY1Q86X52 802 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 CPNE8Q86YQ8 564 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 IQCF2Q8IXL9 164 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 PSPC1Q8WXF1 523 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 GPATCH1Q9BRR8 931 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 GBA3Q9H227 469 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 ZHX3Q9H4I2 956 aa17.39■□□□□ 0.37
NPRL3-201ENST00000399953 LIN28AQ9H9Z2 209 aaKnown RBP17.39■□□□□ 0.37
NPRL3-201ENST00000399953 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SEPT6Q14141 434 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 RABGAP1LQ5R372 815 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SAMD3Q8N6K7 520 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 POU5F2Q8N7G0 328 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SHKBP1Q8TBC3 707 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 ALKBH8Q96BT7 664 aaKnown RBP17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SLC37A4O43826 429 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 CRTAMO95727 393 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 CYP2C9P11712 490 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 CDH3P22223 829 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 CPOXP36551 454 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 C6orf183Q5T699 404 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
NPRL3-201ENST00000399953 GPBP1Q86WP2 473 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SREK1Q8WXA9 508 aaKnown RBP17.38■□□□□ 0.37
NPRL3-201ENST00000399953 HAUS8Q9BT25 410 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 SMYD3Q9H7B4 428 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 CHORDC1Q9UHD1 332 aaPredicted RBP17.38■□□□□ 0.37
NPRL3-201ENST00000399953 AP4B1Q9Y6B7 739 aa17.38■□□□□ 0.37
NPRL3-201ENST00000399953 PDXKO00764 312 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 FUCA1P04066 466 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 POLR2MP0CAP2 368 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 THRAP10827 490 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 TMEM214Q6NUQ4 689 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 DZIP1Q86YF9 867 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 PPM1KQ8N3J5 372 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 BORCS5Q969J3 196 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 KLC2Q9H0B6 622 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 C12orf65Q9H3J6 166 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 SLC38A7Q9NVC3 462 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 TRNAU1APQ9NX07 287 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 MYOCOSA0A1B0GUC4 107 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 SOBPA7XYQ1 873 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 KRT18P05783 430 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 C6orf222P0C671 652 aaPredicted RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 CASP4P49662 377 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 CASP5P51878 434 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 DYNLL1P63167 89 aaKnown RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 NIPAL1Q6NVV3 410 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 BANPQ8N9N5 519 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 CCDC106Q9BWC9 280 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 FHDC1Q9C0D6 1143 aaPredicted RBP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.37
NPRL3-201ENST00000399953 CCPG1Q9ULG6 757 aa17.37■□□□□ 0.37
NPRL3-201ENST00000399953 BAIAP3O94812 1187 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 NR3C1P04150 777 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
NPRL3-201ENST00000399953 CYP4A11Q02928 519 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 PDIA2Q13087 525 aaKnown RBP17.36■□□□□ 0.37
NPRL3-201ENST00000399953 ZBTB17Q13105 803 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 METTL21CQ5VZV1 264 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 RWDD4Q6NW29 188 aaKnown RBP17.36■□□□□ 0.37
NPRL3-201ENST00000399953 CAPN12Q6ZSI9 719 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 DDHD1Q8NEL9 900 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 RAB3IL1Q8TBN0 382 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 ZNF564Q8TBZ8 553 aaPredicted RBP17.36■□□□□ 0.37
NPRL3-201ENST00000399953 BTBD6Q96KE9 485 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 HGH1Q9BTY7 390 aa17.36■□□□□ 0.37
NPRL3-201ENST00000399953 WWP1Q9H0M0 922 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms