RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 OPN1MW3P0DN78 364 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CASP14P31944 242 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 DNA2P51530 1060 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PPP2R2AP63151 447 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 IRX5P78411 483 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MTFR1Q15390 333 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TSTQ16762 297 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 KBTBD12Q3ZCT8 623 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 ATL3Q6DD88 541 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 KIAA1211LQ6NV74 962 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MEX3BQ6ZN04 569 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TRMT1LQ7Z2T5 733 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 VSTM4Q8IW00 320 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 KRT35Q92764 455 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 COA7Q96BR5 231 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 GIMAP5Q96F15 307 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 GDAP1L1Q96MZ0 367 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 B3GNT4Q9C0J1 378 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MOSPD1Q9UJG1 213 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MRPL11Q9Y3B7 192 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 ATP23Q9Y6H3 246 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MYH13Q9UKX3 1938 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 A0A1W2PPL8 197 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RBAK-RBAKDNI3L0D1 243 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 FFAR2O15552 330 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PHACTR2O75167 634 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MLYCDO95822 493 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RPLP1P05386 114 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 JUNDP17535 347 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CDC25BP30305 580 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 BTDP43251 543 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 IFNAR2P48551 515 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLC12A3P55017 1021 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CASP6P55212 293 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 NEDD9Q14511 834 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 SMAD2Q15796 467 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 DCLRE1AQ6PJP8 1040 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 FBXL16Q8N461 479 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 AADATQ8N5Z0 425 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 IGSF22Q8N9C0 903 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 ATG16L2Q8NAA4 619 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 OR10H5Q8NGA6 315 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 WASF1Q92558 559 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PHF20Q9BVI0 1012 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 FOXP1Q9H334 677 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RABEP2Q9H5N1 569 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 HOMER3Q9NSC5 361 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RASAL2Q9UJF2 1139 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RPS6KA6Q9UK32 745 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 EDARQ9UNE0 448 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 SRPRBQ9Y5M8 271 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 hCG_1807616A0A1W2PRN6 198 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 DDX39AO00148 427 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 B3GALT2O43825 422 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 FGF18O76093 207 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 ATP5BP06576 529 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 TM4SF1P30408 202 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 MSH2P43246 934 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 RBP5P82980 135 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 SNAPC2Q13487 334 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 SYCP1Q15431 976 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 PFKFB4Q16877 469 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 GEN1Q17RS7 908 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 ODF2Q5BJF6 829 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 ABHD17CQ6PCB6 329 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 IYDQ6PHW0 289 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 OLFML1Q6UWY5 402 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 RAD9BQ6WBX8 426 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 GALNT15Q8N3T1 639 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 TC2NQ8N9U0 490 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 PCSK9Q8NBP7 692 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 GDAP1Q8TB36 358 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 CHTF18Q8WVB6 975 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 TIGD1Q96MW7 591 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 HGH1Q9BTY7 390 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 WNT5BQ9H1J7 359 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 TBC1D14Q9P2M4 693 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 PPP2R2CQ9Y2T4 447 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 TMED5Q9Y3A6 229 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 PCDHB12Q9Y5F1 795 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 AP1M2Q9Y6Q5 423 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 ACKR2O00590 384 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 N4BP3O15049 544 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 CTIFO43310 598 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 FGFR1P11362 822 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 PSMC4P43686 418 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 HIRAP54198 1017 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 GSDMDP57764 484 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 COG7P83436 770 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 STARD3Q14849 445 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 UBE2SQ16763 222 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 RASIP1Q5U651 963 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 NPNTQ6UXI9 565 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 DYMQ7RTS9 669 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms