RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 LRRN2O75325 713 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 VNN2O95498 520 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 WEE2P0C1S8 567 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 OR4Q2P0C623 313 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 PTPN1P18031 435 aaKnown RBP18.84■□□□□ 0.61
CTNS-203ENST00000399306 CDK11BP21127 795 aaKnown RBP18.84■□□□□ 0.61
CTNS-203ENST00000399306 MAGEA11P43364 429 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 CDH8P55286 799 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 ZNF445P59923 1031 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 TPM4P67936 248 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 VSTM1Q6UX27 236 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 SCARA5Q6ZMJ2 495 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 B3GALNT2Q8NCR0 500 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.84■□□□□ 0.61
CTNS-203ENST00000399306 SLC7A14Q8TBB6 771 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 TATDN2Q93075 761 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 NT5C1AQ9BXI3 368 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 CISHQ9NSE2 258 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 ASB3Q9Y575 518 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 INSL5Q9Y5Q6 135 aa18.84■□□□□ 0.61
CTNS-203ENST00000399306 CCDC195A0A1B0GUA6 201 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 GRXCR2A6NFK2 248 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 SPDYE4A6NLX3 237 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 H3BQ06 376 aaPredicted RBP18.83■□□□□ 0.6
CTNS-203ENST00000399306 MBTPS2O43462 519 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 SEC24AO95486 1093 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 PDGFRBP09619 1106 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 SPATA31D3P0C874 917 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 RFX1P22670 979 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 ACAT1P24752 427 aaKnown RBP18.83■□□□□ 0.6
CTNS-203ENST00000399306 NDST1P52848 882 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 COPB1P53618 953 aaKnown RBP18.83■□□□□ 0.6
CTNS-203ENST00000399306 SMAD2Q15796 467 aaKnown RBP18.83■□□□□ 0.6
CTNS-203ENST00000399306 ATAT1Q5SQI0 421 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 TRIM65Q6PJ69 517 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 SPATA31D4Q6ZUB0 917 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 UBR7Q8N806 425 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 ZNF707Q96C28 371 aaPredicted RBP18.83■□□□□ 0.6
CTNS-203ENST00000399306 CBX8Q9HC52 389 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 CRTAC1Q9NQ79 661 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 AVENQ9NQS1 362 aaPredicted RBP18.83■□□□□ 0.6
CTNS-203ENST00000399306 PRDM6Q9NQX0 595 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 GTF3C4Q9UKN8 822 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 NME7Q9Y5B8 376 aa18.83■□□□□ 0.6
CTNS-203ENST00000399306 XIRP2A4UGR9 3374 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 ATP8B3O60423 1300 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 MYBPHLA2RUH7 354 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 LRG1P02750 347 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 HAPLN1P10915 354 aaPredicted RBP18.82■□□□□ 0.6
CTNS-203ENST00000399306 PON1P27169 355 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 RAP1GAPP47736 663 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 DUSP4Q13115 394 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 HSP90AA4PQ58FG1 418 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 RARS2Q5T160 578 aaKnown RBP18.82■□□□□ 0.6
CTNS-203ENST00000399306 FKBP15Q5T1M5 1219 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 APTXQ7Z2E3 356 aaKnown RBP18.82■□□□□ 0.6
CTNS-203ENST00000399306 SPATA2LQ8IUW3 424 aaPredicted RBP18.82■□□□□ 0.6
CTNS-203ENST00000399306 ATAD1Q8NBU5 361 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 ASB2Q96Q27 587 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 TMLHEQ9NVH6 421 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 APEX2Q9UBZ4 518 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 KIAA1257Q9ULG3 409 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 CNTN6Q9UQ52 1028 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 YIPF1Q9Y548 306 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 C2orf16Q68DN1 1984 aa18.82■□□□□ 0.6
CTNS-203ENST00000399306 LGALS16A8MUM7 142 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 RFPL2O75678 378 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 ALDH1A3P47895 512 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 MFAP3P55082 362 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 RPL10AP62906 217 aaKnown RBP18.81■□□□□ 0.6
CTNS-203ENST00000399306 CBX2Q14781 532 aaPredicted RBP18.81■□□□□ 0.6
CTNS-203ENST00000399306 PTCRAQ6ISU1 281 aaPredicted RBP18.81■□□□□ 0.6
CTNS-203ENST00000399306 ELMOD1Q8N336 334 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 PPM1KQ8N3J5 372 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 LEMD2Q8NC56 503 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 WHAMMQ8TF30 809 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 SMG7Q92540 1137 aaKnown RBP18.81■□□□□ 0.6
CTNS-203ENST00000399306 PCED1BQ96HM7 432 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 PGLYRP2Q96PD5 576 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 ELOVL4Q9GZR5 314 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 PLCB1Q9NQ66 1216 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 TAB2Q9NYJ8 693 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 PRKAG3Q9UGI9 489 aa18.81■□□□□ 0.6
CTNS-203ENST00000399306 USP15Q9Y4E8 981 aaPredicted RBP18.81■□□□□ 0.6
CTNS-203ENST00000399306 DENND4AQ7Z401 1863 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 GOLGA6L19H0YKK7 550 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 HCRTO43612 131 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 ATP2C2O75185 946 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 PAEPP09466 180 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 SLC9A1P19634 815 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 EPHB3P54753 998 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 PSMC1P62191 440 aaKnown RBP18.8■□□□□ 0.6
CTNS-203ENST00000399306 MDH1BQ5I0G3 518 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 PHLDB3Q6NSJ2 640 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 TMC5Q6UXY8 1006 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 ITIH5Q86UX2 942 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
CTNS-203ENST00000399306 C12orf76Q8N812 135 aaPredicted RBP18.8■□□□□ 0.6
CTNS-203ENST00000399306 MYLPFQ96A32 169 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms