RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CALCAP01258 141 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CPB1P15086 417 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TBXAS1P24557 533 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PCSK1P29120 753 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RAD23BP54727 409 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TPM4P67936 248 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 UBXN1Q04323 297 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FKBP15Q5T1M5 1219 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TMEM184AQ6ZMB5 413 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ACOT1Q86TX2 421 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CRYBG2Q8N1P7 616 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZNF461Q8TAF7 563 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PGLYRP2Q96PD5 576 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 UBE2TQ9NPD8 197 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 IFNKQ9P0W0 207 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CLEC1BQ9P126 229 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 AFF4Q9UHB7 1163 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CNTN6Q9UQ52 1028 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PRUNE2Q8WUY3 3088 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 C1RP00736 705 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TPM2P07951 284 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PNMA6AP0CW24 399 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ATF2P15336 505 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 UCHL3P15374 230 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PTPN1P18031 435 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZNF132P52740 706 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 UBASH3AP57075 661 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZNF394Q53GI3 561 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MDH1BQ5I0G3 518 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SYCE2Q6PIF2 218 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PAQR9Q6ZVX9 377 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ATAD1Q8NBU5 361 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 B3GALNT2Q8NCR0 500 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 KREMEN2Q8NCW0 462 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SHC3Q92529 594 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZSWIM1Q9BR11 485 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FAM124BQ9H5Z6 455 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MAN1C1Q9NR34 630 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 DNAJC12Q9UKB3 198 aa13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SPTBN5Q9NRC6 3674 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-203ENST00000399082 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CLDN5O00501 218 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SOAT2O75908 522 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PAPLNO95428 1278 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CACNA2D1P54289 1103 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TSPY1Q01534 308 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ADCY1Q08828 1119 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TPGS2Q68CL5 300 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SARM1Q6SZW1 724 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 DCP1BQ8IZD4 617 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MAFAQ8NHW3 353 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MYCBPAPQ8TBZ2 947 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PPM1EQ8WY54 764 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PPP2R3CQ969Q6 453 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 JAKMIP2Q96AA8 810 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PABPC5Q96DU9 382 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PCED1BQ96HM7 432 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TMEM176AQ96HP8 235 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MSLNLQ96KJ4 702 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 B3GNT5Q9BYG0 378 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PRDM6Q9NQX0 595 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FAM49BQ9NUQ9 324 aa13.22□□□□□ -0.29
HLA-DQB1-203ENST00000399082 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 COL6A3P12111 3177 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RFPL2O75678 378 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZMYND10O75800 440 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CCDC130P13994 396 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MFAP3P55082 362 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 JAM2P57087 298 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 DUSP4Q13115 394 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TCEAL8Q8IYN2 117 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 C12orf76Q8N812 135 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RBBP8NLQ8NC74 664 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TFAP2BQ92481 460 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CASP10Q92851 521 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZNF707Q96C28 371 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ZNF518BQ9C0D4 1074 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ACP6Q9NPH0 428 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms