RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ACSF2Q96CM8 615 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 ZNF317Q96PQ6 595 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 FHDC1Q9C0D6 1143 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 PDZD7Q9H5P4 517 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 ASB7Q9H672 318 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 CCDC134Q9H6E4 229 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 SYNCQ9H7C4 482 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 WDR35Q9P2L0 1181 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 CYTH4Q9UIA0 394 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 DRG1Q9Y295 367 aaKnown RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 DNALI1O14645 258 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 CSDE1O75534 798 aaKnown RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 GH1P01241 217 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 KRT7P08729 469 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 ARSEP51690 589 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 GSCP56915 257 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 GJC2Q5T442 439 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 LINC01465Q8N7H1 131 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 GTF3C2Q8WUA4 911 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 RBM15Q96T37 977 aaKnown RBP eCLIP14.6□□□□□ -0.074e-15■■■□□ 14.6
PRAME-202ENST00000398743 PPP1R16BQ96T49 567 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 PRMT1Q99873 361 aaKnown RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 SDCBP2Q9H190 292 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 SMYD3Q9H7B4 428 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 VRTNQ9H8Y1 702 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 CILPO75339 1184 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 LRCH4O75427 683 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 P4HA1P13674 534 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 VCPP55072 806 aaKnown RBP14.59□□□□□ -0.07
PRAME-202ENST00000398743 CCNA1P78396 465 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 SLC25A11Q02978 314 aaKnown RBP14.59□□□□□ -0.07
PRAME-202ENST00000398743 ORC1Q13415 861 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 OASLQ15646 514 aaKnown RBP14.59□□□□□ -0.07
PRAME-202ENST00000398743 KYAT1Q16773 422 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 HADHQ16836 314 aaKnown RBP14.59□□□□□ -0.07
PRAME-202ENST00000398743 TTC31Q49AM3 519 aaPredicted RBP14.59□□□□□ -0.07
PRAME-202ENST00000398743 TAPT1Q6NXT6 567 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 GLIS1Q8NBF1 620 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 SLC4A11Q8NBS3 891 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 GPRC5AQ8NFJ5 357 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 PPTC7Q8NI37 304 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 JOSD2Q8TAC2 188 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 HAUS1Q96CS2 278 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 TMEM176AQ96HP8 235 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 CPB2Q96IY4 423 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 CPXM1Q96SM3 734 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 CCDC77Q9BR77 488 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 VTA1Q9NP79 307 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 TJP2Q9UDY2 1190 aa14.59□□□□□ -0.07
PRAME-202ENST00000398743 ITGAVP06756 1048 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 GJA5P36382 358 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 CNGA2Q16280 664 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 ZNF792Q3KQV3 632 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 C9orf131Q5VYM1 1079 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 CCDC121Q6ZUS5 278 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 XYLT1Q86Y38 959 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 CXorf38Q8TB03 319 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 NKD2Q969F2 451 aaPredicted RBP14.58□□□□□ -0.07
PRAME-202ENST00000398743 C9orf72Q96LT7 481 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 TWNKQ96RR1 684 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 CYP3A43Q9HB55 503 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 CTNNAL1Q9UBT7 734 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 EFR3BQ9Y2G0 817 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 COL1A2P08123 1366 aa14.58□□□□□ -0.07
PRAME-202ENST00000398743 NDC80O14777 642 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 CDH16O75309 829 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 VTNP04004 478 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 ZSCAN5DPP0CG00 497 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 ARF4P18085 180 aaPredicted RBP14.58□□□□□ -0.08
PRAME-202ENST00000398743 ADORA2AP29274 412 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 EPHX2P34913 555 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 MAGEA4P43358 317 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 PLCB3Q01970 1234 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 GPS1Q13098 491 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 STAT4Q14765 748 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 SMTNL2Q2TAL5 461 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 DPY19L2Q6NUT2 758 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 EMID1Q96A84 441 aaPredicted RBP14.58□□□□□ -0.08
PRAME-202ENST00000398743 ELOVL4Q9GZR5 314 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 ZWILCHQ9H900 591 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 METTL5Q9NRN9 209 aaKnown RBP14.58□□□□□ -0.08
PRAME-202ENST00000398743 HMGXB4Q9UGU5 601 aa14.58□□□□□ -0.08
PRAME-202ENST00000398743 TPX2Q9ULW0 747 aaKnown RBP14.58□□□□□ -0.08
PRAME-202ENST00000398743 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
PRAME-202ENST00000398743 MICAL2O94851 1124 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 FSBPO95073 299 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ERBB2P04626 1255 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ABHD2P08910 425 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ZNF286BP0CG31 522 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ZNF268Q14587 947 aaPredicted RBP14.57□□□□□ -0.08
PRAME-202ENST00000398743 TMEM132DQ14C87 1099 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 MORF4L2Q15014 288 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 SLC10A6Q3KNW5 377 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 TMEM130Q8N3G9 435 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 AFG1LQ8WV93 481 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 NLRP7Q8WX94 980 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 HPDLQ96IR7 371 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 LGALS13Q9UHV8 139 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.57□□□□□ -0.083e-6■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms