RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 SCARA3Q6AZY7 606 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ZPBP2Q6X784 338 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ASRGL1Q7L266 308 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ANKMY2Q8IV38 441 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 DENND1AQ8TEH3 1009 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 PRCCQ92733 491 aaPredicted RBP13.79□□□□□ -0.2
PRAME-201ENST00000398741 RAB3IPQ96QF0 476 aaPredicted RBP13.79□□□□□ -0.2
PRAME-201ENST00000398741 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
PRAME-201ENST00000398741 STRIP2Q9ULQ0 834 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 L3MBTL1Q9Y468 752 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 USH1CQ9Y6N9 552 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 C19orf81C9J6K1 198 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 CCND1P24385 295 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ALDH3A1P30838 453 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ICAM3P32942 547 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 RPA3P35244 121 aaPredicted RBP13.79□□□□□ -0.2
PRAME-201ENST00000398741 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 GRM1Q13255 1194 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 PDK4Q16654 411 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 DUOXA2Q1HG44 320 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ACCSLQ4AC99 568 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 NIPA2Q8N8Q9 360 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
PRAME-201ENST00000398741 MYLK2Q9H1R3 596 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ZWILCHQ9H900 591 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 EBF2Q9HAK2 575 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 ETNK1Q9HBU6 452 aa13.79□□□□□ -0.2
PRAME-201ENST00000398741 NOP53Q9NZM5 478 aaKnown RBP13.79□□□□□ -0.2
PRAME-201ENST00000398741 LOC102724159A0A0B4J2E5 919 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 A8MUI8 341 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 TOM1L1O75674 476 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 DCTN3O75935 186 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 ATP5HO75947 161 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 POLR2BP30876 1174 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 ARL4CP56559 192 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 GEMIN4P57678 1058 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 PWP2Q15269 919 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 SURF1Q15526 300 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 SEPT7Q16181 437 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 CATSPERGQ6ZRH7 1159 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 RGS9BPQ6ZS82 235 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 PYROXD1Q8WU10 500 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 ERP27Q96DN0 273 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 ANP32DO95626 131 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 KRT7P08729 469 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 EFNA5P52803 228 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 YARSP54577 528 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 TFAMQ00059 246 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 OTUD4Q01804 1114 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 FAM160B1Q5W0V3 765 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 ATP11CQ8NB49 1132 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 TTC13Q8NBP0 860 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 DNERQ8NFT8 737 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 SLC35B2Q8TB61 432 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
PRAME-201ENST00000398741 RSAD2Q8WXG1 361 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 SLCO1B3Q9NPD5 702 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
PRAME-201ENST00000398741 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 OGTO15294 1046 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
PRAME-201ENST00000398741 BANF1O75531 89 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 KRT3P12035 628 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 CD19P15391 556 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
PRAME-201ENST00000398741 STAT5BP51692 787 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
PRAME-201ENST00000398741 RASA2Q15283 850 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 SMTNL2Q2TAL5 461 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 EFHC2Q5JST6 749 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 ZBTB8OSQ8IWT0 167 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 WDTC1Q8N5D0 677 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 ACTL9Q8TC94 416 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 L3MBTL3Q96JM7 780 aaPredicted RBP13.77□□□□□ -0.21
PRAME-201ENST00000398741 FRMD8P1Q9BZ68 369 aaPredicted RBP13.77□□□□□ -0.21
PRAME-201ENST00000398741 MAF1Q9H063 256 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 HOXC10Q9NYD6 342 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 ZNF112Q9UJU3 913 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 FZD1Q9UP38 647 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 C15orf41Q9Y2V0 281 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 DOCK5Q9H7D0 1870 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 KIAA1217Q5T5P2 1943 aa13.77□□□□□ -0.21
PRAME-201ENST00000398741 IGKV6D-21A0A0A0MT36 114 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms