RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 DPF2Q92785 391 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 FDXACB1Q9BRP7 624 aaPredicted RBP11.84□□□□□ -0.51
TTC28-201ENST00000397906 SLC18A3Q16572 532 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
TTC28-201ENST00000397906 ADGRG1Q9Y653 693 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 A0A1W2PQC6 194 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 ALDH2P05091 517 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 KCNT1Q5JUK3 1230 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 CDCA5Q96FF9 252 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 RHOBTB3O94955 611 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 ANKEF1Q9NU02 776 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 PSMD3O43242 534 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 RHOBTB1O94844 696 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 RAP1GDS1P52306 607 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 CUL2Q13617 745 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 MAPRE1Q15691 268 aaKnown RBP11.84□□□□□ -0.51
TTC28-201ENST00000397906 PCDHB2Q9Y5E7 798 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 ANKRD65E5RJM6 399 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 NDUFB5O43674 189 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 BEX3Q00994 111 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 PDIA6Q15084 440 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 MPZL3Q6UWV2 235 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 RD3Q7Z3Z2 195 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 FAM96AQ9H5X1 160 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 IL1RL2Q9HB29 575 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 PNPLA6Q8IY17 1366 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 CAPZA2P47755 286 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.51
TTC28-201ENST00000397906 GOLPH3Q9H4A6 298 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 NEU2Q9Y3R4 380 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 CBX4O00257 560 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 MAN1C1Q9NR34 630 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 TSPAN3O60637 253 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 POLBP06746 335 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 DDX5P17844 614 aaKnown RBP11.84□□□□□ -0.51
TTC28-201ENST00000397906 NCALDP61601 193 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 ANO9A1A5B4 782 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 PDK1Q15118 436 aa11.84□□□□□ -0.51
TTC28-201ENST00000397906 SMAD5Q99717 465 aaKnown RBP11.84□□□□□ -0.51
TTC28-201ENST00000397906 MED24O75448 989 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 KDSRQ06136 332 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 COG1Q8WTW3 980 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 SNTG2Q9NY99 539 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 MYL2P10916 166 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 PPP2R2AP63151 447 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 HPCAP84074 193 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 DMC1Q14565 340 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 TCEA2Q15560 299 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 GRIK4Q16099 956 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 EIF4E1BA6NMX2 242 aaKnown RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 AP3B1O00203 1094 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 CST8O60676 142 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 KRT4P19013 534 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 DDX39BQ13838 428 aaKnown RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 MTHFD1LQ6UB35 978 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 HES6Q96HZ4 224 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 ENO1P06733 434 aaKnown RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 FAXCQ5TGI0 409 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 ERAP2Q6P179 960 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 UVRAGQ9P2Y5 699 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 PLA2G4CQ9UP65 541 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 RGS4P49798 205 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 XRRA1Q6P2D8 792 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 TRAPPC12Q8WVT3 735 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 SHCBP1LQ9BZQ2 653 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 GIMAP4Q9NUV9 329 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 LAMTOR4Q0VGL1 99 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 PRR23CQ6ZRP0 262 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 PDGFDQ9GZP0 370 aaPredicted RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 RNF19AQ9NV58 838 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 WNT10BO00744 389 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 RABGAP1LQ5R372 815 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 FAM171A1Q5VUB5 890 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 SCOCQ9UIL1 159 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 SLC12A8A0AV02 714 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 C2orf81A6NN90 581 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 NAMPTP43490 491 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 KLF6Q99612 283 aaPredicted RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 SYTL2Q9HCH5 934 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 TRPM5Q9NZQ8 1165 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 H3BRB1 525 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 STX7O15400 261 aaKnown RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 TUT1Q9H6E5 874 aaKnown RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 NPHS2Q9NP85 383 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 SPASTQ9UBP0 616 aa11.83□□□□□ -0.52
TTC28-201ENST00000397906 DBR1Q9UK59 544 aaKnown RBP11.83□□□□□ -0.52
TTC28-201ENST00000397906 GRIN1Q05586 938 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 LLGL2Q6P1M3 1020 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 C17orf80Q9BSJ5 609 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 DTNAQ9Y4J8 743 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 PHF2O75151 1096 aa11.82□□□□□ -0.52
TTC28-201ENST00000397906 FKBP9O95302 570 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms