RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ORC1Q13415 861 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 CFAP221Q4G0U5 840 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 LIMS2Q7Z4I7 341 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 ZNF280BQ86YH2 543 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 NPAS4Q8IUM7 802 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 TOP6BLQ8N6T0 577 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 SLC4A11Q8NBS3 891 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 C3orf58Q8NDZ4 430 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 CASD1Q96PB1 797 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 TAS2R14Q9NYV8 317 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 PCDHGC5Q9Y5F6 944 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 SCN1AP35498 2009 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 B3GAT3O94766 335 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 CD19P15391 556 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 BRD2P25440 801 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 DSC1Q08554 894 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 NNTQ13423 1086 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 EMBQ6PCB8 327 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 DPH6Q7L8W6 267 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 OR6B3Q8NGW1 331 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 SENP8Q96LD8 212 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 FAM193BQ96PV7 902 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 NT5C1AQ9BXI3 368 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 ABHD14A-ACY1A0A1B0GW23 586 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 CFHP08603 1231 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 H2AFZP0C0S5 128 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 GZMAP12544 262 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 GATMP50440 423 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 EPHB4P54760 987 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 DSTYKQ6XUX3 929 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 H2AFVQ71UI9 128 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 KBTBD7Q8WVZ9 684 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 TFAP2BQ92481 460 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 HEXIM2Q96MH2 286 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 ZSWIM1Q9BR11 485 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 SNX25Q9H3E2 840 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 PRKAG2Q9UGJ0 569 aa20.5■□□□□ 0.87
PDLIM2-204ENST00000397760 MKI67P46013 3256 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 FAM170AA1A519 330 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 B4GALT3O60512 393 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 RNF40O75150 1001 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 GYS2P54840 703 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 CLEC16AQ2KHT3 1053 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 DCLRE1AQ6PJP8 1040 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 UNC93AQ86WB7 457 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 COLGALT2Q8IYK4 626 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 ADGRF2Q8IZF7 708 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 STIM2Q9P246 746 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 SALL4Q9UJQ4 1053 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 INTUQ9ULD6 942 aa20.49■□□□□ 0.87
PDLIM2-204ENST00000397760 A8MXQ7 604 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 RTN2O75298 545 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 UPP2O95045 317 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 FTLP02792 175 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 FAM163BP0C2L3 166 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 GNL1P36915 607 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 GALCP54803 685 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 PAN2Q504Q3 1202 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 CAVIN3Q969G5 261 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 CYFIP2Q96F07 1278 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 LRRC1Q9BTT6 524 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 TBKBP1A7MCY6 615 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 MED7O43513 233 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 CYP1A1P04798 512 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 PFKMP08237 780 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 ACRP10323 421 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 VDRP11473 427 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 PAX3P23760 479 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 OR1G1P47890 313 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 IFI16Q16666 785 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 TIGD5Q53EQ6 642 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 WSCD1Q658N2 575 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 ACAD10Q6JQN1 1059 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 CD300LGQ6UXG3 332 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 TRIM72Q6ZMU5 477 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 PASD1Q8IV76 773 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 HASPINQ8TF76 798 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 KIAA1257Q9ULG3 409 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 NME7Q9Y5B8 376 aa20.48■□□□□ 0.87
PDLIM2-204ENST00000397760 PDGFRBP09619 1106 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 UNGP13051 313 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 WARSP23381 471 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 MEI1Q5TIA1 1274 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 ALS2CLQ60I27 953 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 ACOT1Q86TX2 421 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 RSPH1Q8WYR4 309 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 FAM204AQ9H8W3 233 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 DNAJB4Q9UDY4 337 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 PCDHGC3Q9UN70 934 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 MYH10P35580 1976 aa20.47■□□□□ 0.87
PDLIM2-204ENST00000397760 ANKRD62A6NC57 917 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 TULP2O00295 520 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 KIF4AO95239 1232 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 MYBL2P10244 700 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 ABCB4P21439 1286 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 LMO2P25791 158 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms