RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 FAM228BP0C875 321 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 PTENP60484 403 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 NSUN2Q08J23 767 aaKnown RBP eCLIP16.13■□□□□ 0.17
LSS-202ENST00000397728 BOLA3Q53S33 107 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 NOMO2Q5JPE7 1267 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 PARD6BQ9BYG5 372 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 ATXN3LQ9H3M9 355 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 TRIM10Q9UDY6 481 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
LSS-202ENST00000397728 F5H5T6 163 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 SEC31AO94979 1220 aaKnown RBP16.13■□□□□ 0.17
LSS-202ENST00000397728 BST2Q10589 180 aaKnown RBP16.13■□□□□ 0.17
LSS-202ENST00000397728 PCSK7Q16549 785 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 SLC39A12Q504Y0 691 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 NT5DC4Q86YG4 428 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 PPM1NQ8N819 430 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 TMEM161BQ8NDZ6 487 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 CLEC4DQ8WXI8 215 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 FAM118BQ9BPY3 351 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 OSBPL8Q9BZF1 889 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 CDT1Q9H211 546 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.13■□□□□ 0.17
LSS-202ENST00000397728 CASP5P51878 434 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 RRP1BQ14684 758 aaKnown RBP16.13■□□□□ 0.17
LSS-202ENST00000397728 SLC47A2Q86VL8 602 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 FAM131BQ86XD5 332 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 PCDHB8Q9UN66 801 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 SLC4A7Q9Y6M7 1214 aa16.13■□□□□ 0.17
LSS-202ENST00000397728 GLIS3Q8NEA6 775 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 SPATA18Q8TC71 538 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 MRPL17Q9NRX2 175 aaKnown RBP16.12■□□□□ 0.17
LSS-202ENST00000397728 IQANK1A0A1B0GTG1 560 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 F9P00740 461 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 IL9RQ01113 521 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 PDIA2Q13087 525 aaKnown RBP16.12■□□□□ 0.17
LSS-202ENST00000397728 PPM1LQ5SGD2 360 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 IZUMO3Q5VZ72 239 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 FRA10AC1Q70Z53 315 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 OTOP2Q7RTS6 562 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 EDEM1Q92611 657 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 SYN2Q92777 582 aaPredicted RBP16.12■□□□□ 0.17
LSS-202ENST00000397728 AMACRQ9UHK6 382 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 SPATA31C1P0DKV0 1188 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 TPD52P55327 224 aaPredicted RBP16.12■□□□□ 0.17
LSS-202ENST00000397728 DRP2Q13474 957 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 RAB6BQ9NRW1 208 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 NDFIP2Q9NV92 336 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 GNGT1P63211 74 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 GIPC2Q8TF65 315 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 UCMAQ8WVF2 138 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 SLC35C1Q96A29 364 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 KLHL14Q9P2G3 628 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
LSS-202ENST00000397728 PRR23AA6NEV1 266 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 ARHGEF7Q14155 803 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 PDK1Q15118 436 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 B4GALNT4Q76KP1 1039 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 ZBED8Q8IZ13 594 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 EMC1Q8N766 993 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 ATL2Q8NHH9 583 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 SLC2A14Q8TDB8 520 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 SCG3Q8WXD2 468 aaKnown RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 XYLBO75191 536 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 FBXO21O94952 628 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 RBP3P10745 1247 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 E2F4Q16254 413 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 EEF1DP3Q658K8 133 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 GIMAP7Q8NHV1 300 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 CDC26Q8NHZ8 85 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 CIPCQ9C0C6 399 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 VPS11Q9H270 941 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 WDR91A4D1P6 747 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 LRRIQ3A6PVS8 624 aaPredicted RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 F8VZ95 297 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 KRT38O76015 456 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 ZKSCAN8Q15776 578 aaPredicted RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 GLE1Q53GS7 698 aaKnown RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 C7orf61Q8IZ16 206 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 STMN2Q93045 179 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 SETSIPP0DME0 302 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 KCNA2P16389 499 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 RRM1P23921 792 aa16.11■□□□□ 0.17
LSS-202ENST00000397728 TUFMP49411 452 aaKnown RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 ARHGEF2Q92974 986 aaKnown RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 TLR8Q9NR97 1041 aaKnown RBP16.11■□□□□ 0.17
LSS-202ENST00000397728 NT5C1B-RDH14C9J2C7 533 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 DNAJC6O75061 913 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 SELPP16109 830 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 N4BP2L2Q92802 583 aaPredicted RBP16.1■□□□□ 0.17
LSS-202ENST00000397728 LOC102724159A0A0B4J2E5 919 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 SMIM35A0A1B0GVV1 85 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 NFICP08651 508 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 BDNFP23560 247 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 CAV1Q03135 178 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 PWP2Q15269 919 aaKnown RBP16.1■□□□□ 0.17
LSS-202ENST00000397728 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 KCNT1Q5JUK3 1230 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms