RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 LRRTM3Q86VH5 581 aa20.72■□□□□ 0.91
MAP1LC3A-203ENST00000397709 TC2NQ8N9U0 490 aa20.72■□□□□ 0.91
MAP1LC3A-203ENST00000397709 PDLIM2Q96JY6 352 aa20.72■□□□□ 0.91
MAP1LC3A-203ENST00000397709 TTYH1Q9H313 450 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3A-203ENST00000397709 CDY1Q9Y6F8 540 aa20.72■□□□□ 0.91
MAP1LC3A-203ENST00000397709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 C2orf71A6NGG8 1288 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 ADAM12O43184 909 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 OR4Q2P0C623 313 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 HNRNPH3P31942 346 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 BPIFB4P59827 614 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 ASIC2Q16515 512 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 CCDC142Q17RM4 750 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 IRF2BP2Q7Z5L9 587 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 SLC47A2Q86VL8 602 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 GPIHBP1Q8IV16 184 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 DCP1BQ8IZD4 617 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 MRPL43Q8N983 215 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 MYCBPAPQ8TBZ2 947 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 LPIN3Q9BQK8 851 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 ACP6Q9NPH0 428 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 ABHD10Q9NUJ1 306 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 KIAA1257Q9ULG3 409 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 PCDHGC5Q9Y5F6 944 aa20.71■□□□□ 0.91
MAP1LC3A-203ENST00000397709 HIDE1A8MVS5 230 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 RFXAPO00287 272 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 TEX28O15482 410 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CALCAP01258 141 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CNPP09543 421 aaKnown RBP20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 VDRP11473 427 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CYP11B1P15538 503 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 GNA15P30679 374 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PRKCIP41743 596 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 NDUFV1P49821 464 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ROR1Q01973 937 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PTK2Q05397 1052 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 MDH1BQ5I0G3 518 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ARHGAP17Q68EM7 881 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 C12orf29Q8N999 325 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 OR8K1Q8NGG5 319 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 HEXIM2Q96MH2 286 aaKnown RBP20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 KLHL5Q96PQ7 755 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ZSWIM1Q9BR11 485 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 TMLHEQ9NVH6 421 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 GTF3C4Q9UKN8 822 aa20.7■□□□□ 0.9
MAP1LC3A-203ENST00000397709 TRANK1O15050 2925 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 GOLGA6L6A8MZA4 724 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CSPG5O95196 566 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CCDC172P0C7W6 258 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CD19P15391 556 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 BRD2P25440 801 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 OR1D2P34982 312 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CA8P35219 290 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ARID5AQ03989 594 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 GPR17Q13304 367 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 RAB33AQ14088 237 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 MAPRE1Q15691 268 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 SLC39A12Q504Y0 691 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 SGO2Q562F6 1265 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 MICAL1Q8TDZ2 1067 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 EPS8L1Q8TE68 723 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 TFAP2BQ92481 460 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 MYLPFQ96A32 169 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 LRCH3Q96II8 777 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 EMILIN2Q9BXX0 1053 aa20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 NOCTQ9UK39 431 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3A-203ENST00000397709 WDR27A2RRH5 827 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CCDC130P13994 396 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 CPB1P15086 417 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PDE6CP51160 858 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ARPP19P56211 112 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 SMARCB1Q12824 385 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 NFE2Q16621 373 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PTPROQ16827 1216 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PPP1R26Q5T8A7 1209 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 HGSNATQ68CP4 663 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 WDR59Q6PJI9 974 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 NOP9Q86U38 636 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ZNF606Q8WXB4 792 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 DDX1Q92499 740 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 MRPL38Q96DV4 380 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PCED1BQ96HM7 432 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 B3GNT5Q9BYG0 378 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 FAM49BQ9NUQ9 324 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PTPRDP23468 1912 aa20.68■□□□□ 0.9
MAP1LC3A-203ENST00000397709 O00370 1275 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 THAP12O43422 761 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ABLIM3O94929 683 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 VNN2O95498 520 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 GSDMDP57764 484 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 STILQ15468 1287 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 MEA1Q16626 185 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ZNF697Q5TEC3 545 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 TPGS2Q68CL5 300 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 C4orf50Q6ZRC1 276 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 PAQR9Q6ZVX9 377 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 ZNF677Q86XU0 584 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 GLYCTKQ8IVS8 523 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 FUKQ8N0W3 1084 aa20.67■□□□□ 0.9
MAP1LC3A-203ENST00000397709 SLC2A14Q8TDB8 520 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms