RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ARHGAP15Q53QZ3 475 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 BOLA3Q53S33 107 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 OR5B17Q8NGF7 314 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 LPPQ93052 612 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 ELOVL4Q9GZR5 314 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 KLHL8Q9P2G9 620 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 TSPAN16Q9UKR8 245 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 KRT15P19012 456 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ARL1P40616 181 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 PLTPP55058 493 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 CLEC16AQ2KHT3 1053 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 KRT71Q3SY84 523 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 DCLRE1AQ6PJP8 1040 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 CDKL3Q8IVW4 592 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 DAW1Q8N136 415 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 CRYGNQ8WXF5 182 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 FBXO32Q969P5 355 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 TBC1D31Q96DN5 1066 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 VCPIP1Q96JH7 1222 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ARHGAP39Q9C0H5 1083 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 NSRP1Q9H0G5 558 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 APOL1O14791 398 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 AP5Z1O43299 807 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 COMTP21964 271 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 EPHB3P54753 998 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 POU5F1Q01860 360 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ENPEPQ07075 957 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 MAPK7Q13164 816 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 HEATR6Q6AI08 1181 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 SLC20A1Q8WUM9 679 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ZBTB10Q96DT7 871 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 CCDC97Q96F63 343 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 SMARCD1Q96GM5 515 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 GOLGA6L7A0A1B0GV03 622 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ASS1P00966 412 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ATP1A1P05023 1023 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ACAT1P24752 427 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 PPM1AP35813 382 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 MAP3K7CLP57077 242 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ZCWPW2Q504Y3 356 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 C10orf120Q5SQS8 335 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ZDHHC17Q8IUH5 632 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 YAF2Q8IY57 180 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 PDIK1LQ8N165 341 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 LRRC43Q8N309 656 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 GSDMBQ8TAX9 411 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 MRPS31Q92665 395 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ATP2A3Q93084 1043 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 EMILIN2Q9BXX0 1053 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 A0A1B0GUA9 196 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 PPP1R12AO14974 1030 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 DNAJB2P25686 324 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 HARS2P49590 506 aaKnown RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 EPHB4P54760 987 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 YWHAGP61981 247 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 TBX2Q13207 712 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 NUDT18Q6ZVK8 323 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 ITIH5Q86UX2 942 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 NDUFAF2Q8N183 169 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 FIBCD1Q8N539 461 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 IRX2Q9BZI1 471 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 FBXO44Q9H4M3 255 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 C11orf49Q9H6J7 331 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 DMAP1Q9NPF5 467 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-204ENST00000397606 TRPM5Q9NZQ8 1165 aa8.7□□□□□ -1.02
PTPRD-204ENST00000397606 SMIM28A0A1B0GU29 152 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 CPP00450 1065 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 MX2P20592 715 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 TUFMP49411 452 aaKnown RBP8.69□□□□□ -1.02
PTPRD-204ENST00000397606 EPHB1P54762 984 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 PPIGQ13427 754 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPRD-204ENST00000397606 CUL1Q13616 776 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPRD-204ENST00000397606 FAM76AQ8TAV0 307 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 GDAP1L1Q96MZ0 367 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 SH3BP1Q9Y3L3 701 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 A0A0A6YYK5 440 aaPredicted RBP8.69□□□□□ -1.02
PTPRD-204ENST00000397606 CCDC85CA6NKD9 419 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
PTPRD-204ENST00000397606 RRM1P23921 792 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 SLMAPQ14BN4 828 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 TRIP13Q15645 432 aaPredicted RBP8.69□□□□□ -1.02
PTPRD-204ENST00000397606 PCGF5Q86SE9 256 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 WDR24Q96S15 920 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 SPON2Q9BUD6 331 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 NFKBIZQ9BYH8 718 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 DDIT4Q9NX09 232 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 RASSF10A6NK89 507 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 PIGRP01833 764 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 PRKCIP41743 596 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 IRF2BP1Q8IU81 584 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 SHC3Q92529 594 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 SMYD3Q9H7B4 428 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 SP110Q9HB58 689 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 CYP4F11Q9HBI6 524 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 TKTL1P51854 596 aa8.69□□□□□ -1.02
PTPRD-204ENST00000397606 ROR1Q01973 937 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms