RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 WDR72Q3MJ13 1102 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 COBLL1Q53SF7 1204 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 ZNF658Q5TYW1 1059 aaPredicted RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 INTS8Q75QN2 995 aaKnown RBP15.59■□□□□ 0.09
SEC13-208ENST00000397109 OSTM1Q86WC4 334 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 LRRC3Q9BY71 257 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 MFSD1Q9H3U5 465 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 VRTNQ9H8Y1 702 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 SLC2A4RGQ9NR83 387 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 CDH9Q9ULB4 789 aa15.59■□□□□ 0.09
SEC13-208ENST00000397109 SOAT2O75908 522 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 C4BPAP04003 597 aaKnown RBP15.58■□□□□ 0.08
SEC13-208ENST00000397109 KRT13P13646 458 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 ACAT1P24752 427 aaKnown RBP15.58■□□□□ 0.08
SEC13-208ENST00000397109 PSMC2P35998 433 aaKnown RBP15.58■□□□□ 0.08
SEC13-208ENST00000397109 MYL6P60660 151 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 RPL10AP62906 217 aaKnown RBP15.58■□□□□ 0.08
SEC13-208ENST00000397109 ADAM9Q13443 819 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 NCOA4Q13772 614 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 TDRD10Q5VZ19 366 aaKnown RBP15.58■□□□□ 0.08
SEC13-208ENST00000397109 C4orf50Q6ZRC1 276 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 TMC8Q8IU68 726 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 SPATA2LQ8IUW3 424 aaPredicted RBP15.58■□□□□ 0.08
SEC13-208ENST00000397109 KBTBD7Q8WVZ9 684 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 FUBP3Q96I24 572 aaKnown RBP eCLIP15.58■□□□□ 0.08
SEC13-208ENST00000397109 PKMYT1Q99640 499 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 PRRX2Q99811 253 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 SNX25Q9H3E2 840 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 TMLHEQ9NVH6 421 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 RAPGEFL1Q9UHV5 662 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 GTF3C4Q9UKN8 822 aa15.58■□□□□ 0.08
SEC13-208ENST00000397109 MOSPD3O75425 235 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 CFHP08603 1231 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 GNL1P36915 607 aaPredicted RBP15.57■□□□□ 0.08
SEC13-208ENST00000397109 VAMP7P51809 220 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 ZNF699Q32M78 642 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 ZACNQ401N2 412 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 CFAP221Q4G0U5 840 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 ZCWPW2Q504Y3 356 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 FAM171BQ6P995 826 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 FAM186BQ8IYM0 893 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 TRIML1Q8N9V2 468 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 SHKBP1Q8TBC3 707 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 ERCC4Q92889 916 aaPredicted RBP15.57■□□□□ 0.08
SEC13-208ENST00000397109 ELSPBP1Q96BH3 223 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 PI4K2AQ9BTU6 479 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 RPP25Q9BUL9 199 aaKnown RBP15.57■□□□□ 0.08
SEC13-208ENST00000397109 XYLT2Q9H1B5 865 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 ZFP14Q9HCL3 533 aa15.57■□□□□ 0.08
SEC13-208ENST00000397109 CETN3O15182 167 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 AKAP3O75969 853 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 PDGFBP01127 241 aaPredicted RBP15.56■□□□□ 0.08
SEC13-208ENST00000397109 CSH1P0DML2 217 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 CSH2P0DML3 217 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 P4HA1P13674 534 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 ATF6P18850 670 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 CDC25CP30307 473 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 AVPR2P30518 371 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 PPP1R2P41236 205 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 PRCPP42785 496 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 CLCN5P51795 746 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 NUBP1P53384 320 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 DLG4P78352 724 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 PFKPQ01813 784 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 TYRO3Q06418 890 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 STIM1Q13586 685 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 TEAD2Q15562 447 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 SGSM1Q2NKQ1 1148 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 ARHGAP15Q53QZ3 475 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 ZNF667Q5HYK9 610 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 FAM78AQ5JUQ0 283 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 SV2AQ7L0J3 742 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 SMYD4Q8IYR2 804 aaPredicted RBP15.56■□□□□ 0.08
SEC13-208ENST00000397109 SIX5Q8N196 739 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 ST13P5Q8NFI4 369 aaPredicted RBP15.56■□□□□ 0.08
SEC13-208ENST00000397109 OR6B3Q8NGW1 331 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 TAF4BQ92750 862 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 SMARCD2Q92925 531 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 E2F7Q96AV8 911 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 PDLIM2Q96JY6 352 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 ASB16Q96NS5 453 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 GCNAQ96QF7 691 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 TSG101Q99816 390 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 KXD1Q9BQD3 176 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 MKNK1Q9BUB5 465 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 SLITRK6Q9H5Y7 841 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 TRPV4Q9HBA0 871 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 MAGEC2Q9UBF1 373 aaPredicted RBP15.56■□□□□ 0.08
SEC13-208ENST00000397109 NXF1Q9UBU9 619 aaKnown RBP15.56■□□□□ 0.08
SEC13-208ENST00000397109 ZMYM5Q9UJ78 669 aa15.56■□□□□ 0.08
SEC13-208ENST00000397109 A0A1W2PRU2 124 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 MYBPHLA2RUH7 354 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 PDGFRBP09619 1106 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 GJA1P17302 382 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 LMO2P25791 158 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 GABRR2P28476 465 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 MAGEA11P43364 429 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms