RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SIM2Q14190 667 aaPredicted RBP17.54■□□□□ 0.4
CLTA-203ENST00000396603 RRAGBQ5VZM2 374 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 LRRTM3Q86VH5 581 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 WDR5BQ86VZ2 330 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 TRMT2BQ96GJ1 504 aaKnown RBP17.54■□□□□ 0.4
CLTA-203ENST00000396603 CEP295NLQ96MC4 621 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 TMEM206Q9H813 350 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 ABI2Q9NYB9 513 aaPredicted RBP17.54■□□□□ 0.4
CLTA-203ENST00000396603 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 ANK1P16157 1881 aa17.54■□□□□ 0.4
CLTA-203ENST00000396603 KIF26AQ9ULI4 1882 aaPredicted RBP17.54■□□□□ 0.4
CLTA-203ENST00000396603 ATG13O75143 517 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 SOX9P48436 509 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 NLRP12P59046 1061 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 RPL10AP62906 217 aaKnown RBP17.53■□□□□ 0.4
CLTA-203ENST00000396603 MYL7Q01449 175 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 CSRP2Q16527 193 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 CFAP221Q4G0U5 840 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 WDR44Q5JSH3 913 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 DPH6Q7L8W6 267 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 DYMQ7RTS9 669 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 MRPS31Q92665 395 aaKnown RBP17.53■□□□□ 0.4
CLTA-203ENST00000396603 FUBP3Q96I24 572 aaKnown RBP eCLIP17.53■□□□□ 0.4
CLTA-203ENST00000396603 ZFYVE19Q96K21 471 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 MYRFLQ96LU7 910 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 PARD6AQ9NPB6 346 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 TDP1Q9NUW8 608 aa17.53■□□□□ 0.4
CLTA-203ENST00000396603 MYMKA6NI61 221 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 TRDMT1O14717 391 aaKnown RBP17.52■□□□□ 0.4
CLTA-203ENST00000396603 HUS1O60921 280 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 NOL4O94818 638 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 LHX1P48742 406 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 BFSP1Q12934 665 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 RUNX3Q13761 415 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 PON2Q15165 354 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 PDGFRLQ15198 375 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 STK38Q15208 465 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 TMEM196Q5HYL7 178 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 FOXD4L5Q5VV16 416 aaPredicted RBP17.52■□□□□ 0.4
CLTA-203ENST00000396603 PRR23BQ6ZRT6 265 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 Q6ZS52 159 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 USP49Q70CQ1 688 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 MON1AQ86VX9 555 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 PDCL2Q8N4E4 241 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 TOP6BLQ8N6T0 577 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 C1orf127Q8N9H9 656 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 FOXD4L4Q8WXT5 416 aaPredicted RBP17.52■□□□□ 0.4
CLTA-203ENST00000396603 LOXL4Q96JB6 756 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 FAM213AQ9BRX8 229 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 RBM12Q9NTZ6 932 aaKnown RBP17.52■□□□□ 0.4
CLTA-203ENST00000396603 RBAKQ9NYW8 714 aaPredicted RBP17.52■□□□□ 0.4
CLTA-203ENST00000396603 CLIC4Q9Y696 253 aa17.52■□□□□ 0.4
CLTA-203ENST00000396603 CHURC1-FNTBB4DL54 471 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 HRO43593 1189 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 EXTL3O43909 919 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 AKAP3O75969 853 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 GCNT3O95395 438 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 YEATS4O95619 227 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 ITGB3P05106 788 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 PCSK1P29120 753 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 POLR2BP30876 1174 aaKnown RBP17.51■□□□□ 0.39
CLTA-203ENST00000396603 SCN1AP35498 2009 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 NASPP49321 788 aaPredicted RBP17.51■□□□□ 0.39
CLTA-203ENST00000396603 FNTBP49356 437 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 TFAMQ00059 246 aaKnown RBP17.51■□□□□ 0.39
CLTA-203ENST00000396603 GRSF1Q12849 480 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLTA-203ENST00000396603 SLC39A14Q15043 492 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 SURF1Q15526 300 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 FBXO43Q4G163 708 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 INTS6LQ5JSJ4 861 aaKnown RBP17.51■□□□□ 0.39
CLTA-203ENST00000396603 STXBP4Q6ZWJ1 553 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.51■□□□□ 0.39
CLTA-203ENST00000396603 CXorf38Q8TB03 319 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 GIPC2Q8TF65 315 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 USP13Q92995 863 aaPredicted RBP17.51■□□□□ 0.39
CLTA-203ENST00000396603 USP28Q96RU2 1077 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 PKMYT1Q99640 499 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 LRRC27Q9C0I9 530 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 GKN1Q9NS71 199 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 SEMA4GQ9NTN9 838 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 L1RE1Q9UN81 338 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 AGAP1Q9UPQ3 857 aa17.51■□□□□ 0.39
CLTA-203ENST00000396603 GABRDO14764 452 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 SLC30A4O14863 429 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 PRPF40AO75400 957 aaKnown RBP17.5■□□□□ 0.39
CLTA-203ENST00000396603 PFKLP17858 780 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 DRD1P21728 446 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 PDE6CP51160 858 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 RBP5P82980 135 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
CLTA-203ENST00000396603 FAM160A1Q05DH4 1040 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 TNK2Q07912 1038 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 KCNA1Q09470 495 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 SPEM2Q0P670 501 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
CLTA-203ENST00000396603 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 SYCP3Q8IZU3 236 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 CAMKK1Q8N5S9 505 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms