RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ZNF560Q96MR9 790 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SEPT5Q99719 369 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 PI4K2AQ9BTU6 479 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SLC46A2Q9BY10 475 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SMG9Q9H0W8 520 aaKnown RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 XYLT2Q9H1B5 865 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 KCTD10Q9H3F6 313 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 MAGEF1Q9HAY2 307 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CRTAC1Q9NQ79 661 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 TMEM30AQ9NV96 361 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SPATA6Q9NWH7 488 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 DDX43Q9NXZ2 648 aaKnown RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 ABI2Q9NYB9 513 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 GTF3C4Q9UKN8 822 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 ASB3Q9Y575 518 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SPTBN4Q9H254 2564 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CFAP54Q96N23 3096 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 MYH11P35749 1972 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 TSC2P49815 1807 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 MED19A0JLT2 244 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 NCAM2O15394 837 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 KRT19P08727 400 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 PSMC3P17980 439 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 GDI1P31150 447 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 PNPLA4P41247 253 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 MAGEA9P43362 315 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 TUFMP49411 452 aaKnown RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 CACNA2D1P54289 1103 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 PSMC1P62191 440 aaKnown RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 AMPD3Q01432 767 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 FCHO2Q0JRZ9 810 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 PLD1Q13393 1074 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 GAS6Q14393 721 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 UBXN2BQ14CS0 331 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 KNOP1Q1ED39 458 aaKnown RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 DUOXA2Q1HG44 320 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ZNF528Q3MIS6 628 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 MGAT5BQ3V5L5 792 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 GPR158Q5T848 1215 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 TXNDC11Q6PKC3 985 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 METTL23Q86XA0 190 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 WDR49Q8IV35 697 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 C12orf56Q8IXR9 622 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ADGRF2Q8IZF7 708 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ELMOD1Q8N336 334 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 TOP6BLQ8N6T0 577 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 SPPL2BQ8TCT7 592 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 CACTINQ8WUQ7 758 aaKnown RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 CCDC127Q96BQ5 260 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 HPDLQ96IR7 371 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ZFYVE19Q96K21 471 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 NELL2Q99435 816 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 CGRRF1Q99675 332 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ACBD6Q9BR61 282 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 TRMT61BQ9BVS5 477 aaKnown RBP9.51□□□□□ -0.89
ATG4A-205ENST00000394892 LRRC27Q9C0I9 530 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ATXN3LQ9H3M9 355 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 TRPV5Q9NQA5 729 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 C2orf42Q9NWW7 574 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 CFAP45Q9UL16 551 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 CCL26Q9Y258 94 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 PCDHGA2Q9Y5H1 932 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 ANK1P16157 1881 aa9.51□□□□□ -0.89
ATG4A-205ENST00000394892 OTOL1A6NHN0 477 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 PRR5-ARHGAP8B1AHC4 643 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 KIAA0391O15091 583 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 HUS1O60921 280 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 PRPF40AO75400 957 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 VNN1O95497 513 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TMEM191BP0C7N4 346 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TDGF1P13385 188 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 WARSP23381 471 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 WEE1P30291 646 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 NLRP12P59046 1061 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 MYL6P60660 151 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 DLG4P78352 724 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 ARHGAP8P85298 464 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 CSTF1Q05048 431 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TNK2Q07912 1038 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TXNDC8Q6A555 127 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 DCP1BQ8IZD4 617 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 THEM5Q8N1Q8 247 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TMEM86AQ8N2M4 240 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TTC8Q8TAM2 541 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 DNASE1L2Q92874 299 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 SLC22A12Q96S37 553 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 SDCBP2Q9H190 292 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 DPEP3Q9H4B8 488 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 TASP1Q9H6P5 420 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms