RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MCF2LO15068 1137 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 DNAJC6O75061 913 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 UNC5CO95185 931 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 CETPP11597 493 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 ARL1P40616 181 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 PTGER2P43116 358 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 RGS7P49802 495 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 FMO1Q01740 532 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 ZNF572Q7Z3I7 529 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SH3GL3Q99963 347 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SENP7Q9BQF6 1050 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 MECRQ9BV79 373 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 RBAKQ9NYW8 714 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 NUDT17P0C025 328 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 PYGBP11216 843 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 CCND2P30279 289 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 PTK7Q13308 1070 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 HADHQ16836 314 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 ANO5Q75V66 913 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 TTC7BQ86TV6 843 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 RASGEF1CQ8N431 466 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 GPATCH2LQ9NWQ4 482 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 XPO7Q9UIA9 1087 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 C2CD2Q9Y426 696 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 PCDHA3Q9Y5H8 950 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 PDE5AO76074 875 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 GSTA1P08263 222 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 TAC1P20366 129 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 MSX2P35548 267 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 PSMC1P62191 440 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 ALCAMQ13740 583 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 VSTM1Q6UX27 236 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 GMLQ99445 158 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 UNKQ9C0B0 810 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 VPS11Q9H270 941 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SLC38A10Q9HBR0 1119 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 SLC17A7Q9P2U7 560 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 UVRAGQ9P2Y5 699 aa13.87□□□□□ -0.19
NFKB1-202ENST00000394820 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
NFKB1-202ENST00000394820 FAM237BA0A1B0GVD1 139 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 DHX15O43143 795 aaKnown RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 AVILO75366 819 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 ATP4AP20648 1035 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PTGIRP43119 386 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PRKCEQ02156 737 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 CNTN2Q02246 1040 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 GAD2Q05329 585 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 CEP128Q6ZU80 1094 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 NME8Q8N427 588 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 RFWD2Q8NHY2 731 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 ZNF75CPQ92670 426 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 MIS12Q9H081 205 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 KIAA1586Q9HCI6 787 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 RHBDL2Q9NX52 303 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 TRIM49D1C9J1S8 452 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 VWA5AO00534 786 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 CFHP08603 1231 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 RBP3P10745 1247 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 CALB2P22676 271 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 SESN2P58004 480 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 IRX1P78414 480 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 DSTYKQ6XUX3 929 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 GADL1Q6ZQY3 521 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PAF1Q8N7H5 531 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 AGBL3Q8NEM8 1001 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 ACTL9Q8TC94 416 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 MIPOL1Q8TD10 442 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 CEP41Q9BYV8 373 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 RNPEPL1Q9HAU8 725 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 NOP56O00567 594 aaKnown RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 CDH6P55285 790 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 OLFML2BQ68BL8 750 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PIGWQ7Z7B1 504 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PRPF39Q86UA1 669 aaKnown RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 GALNT4Q8N4A0 578 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PPP4R1Q8TF05 950 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 STK32AQ8WU08 396 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 ATP6V0A1Q93050 837 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 BORCS6Q96GS4 357 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PAFAH2Q99487 392 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 TMEM120AQ9BXJ8 343 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 DENND2DQ9H6A0 471 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-202ENST00000394820 PIDD1Q9HB75 910 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 NDE1Q9NXR1 346 aa13.86□□□□□ -0.19
NFKB1-202ENST00000394820 AGO2Q9UKV8 859 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms