RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.74
SIL1-202ENST00000394817 ROPN1Q9HAT0 212 aaPredicted RBP19.64■□□□□ 0.74
SIL1-202ENST00000394817 CYP3A43Q9HB55 503 aa19.64■□□□□ 0.74
SIL1-202ENST00000394817 CYTH4Q9UIA0 394 aa19.64■□□□□ 0.74
SIL1-202ENST00000394817 ZNF236Q9UL36 1845 aa19.64■□□□□ 0.74
SIL1-202ENST00000394817 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.64■□□□□ 0.73
SIL1-202ENST00000394817 SIGLEC16A6NMB1 481 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 E7EVH7 732 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 H3BRB1 525 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 CILPO75339 1184 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 HOXD8P13378 290 aaPredicted RBP19.64■□□□□ 0.73
SIL1-202ENST00000394817 CDH8P55286 799 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 B4GALNT4Q76KP1 1039 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 SAPCD2Q86UD0 394 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 EPS8L3Q8TE67 593 aaKnown RBP19.64■□□□□ 0.73
SIL1-202ENST00000394817 MAML3Q96JK9 1138 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 FAM118BQ9BPY3 351 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 FAM107BQ9H098 131 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 STMN4Q9H169 189 aaPredicted RBP19.64■□□□□ 0.73
SIL1-202ENST00000394817 TUT1Q9H6E5 874 aaKnown RBP19.64■□□□□ 0.73
SIL1-202ENST00000394817 ANAPC5Q9UJX4 755 aa19.64■□□□□ 0.73
SIL1-202ENST00000394817 ATXN2Q99700 1313 aaKnown RBP19.64■□□□□ 0.73
SIL1-202ENST00000394817 hCG_1818297A0A087WSY0 165 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 TLDC2A0PJX2 215 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 RASGRF2O14827 1237 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 KRT10P13645 584 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 ATF7P17544 494 aaPredicted RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 MMP13P45452 471 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 CORO7P57737 925 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 PTPN11Q06124 597 aaPredicted RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 TMEM132DQ14C87 1099 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 ZFYVE27Q5T4F4 411 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 SPATS2Q86XZ4 545 aaKnown RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 CENPTQ96BT3 561 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 TWNKQ96RR1 684 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 DDX23Q9BUQ8 820 aaKnown RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 PPANQ9NQ55 473 aaKnown RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 WDR35Q9P2L0 1181 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 HMGXB4Q9UGU5 601 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 TSPAN1O60635 241 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 P4HA1P13674 534 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 RFC1P35251 1148 aaPredicted RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 TFDP3Q5H9I0 405 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 KAZNQ674X7 775 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 TXNRD3NBQ6F5E7 133 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 TMEM130Q8N3G9 435 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 UHMK1Q8TAS1 419 aaKnown RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 CCHCR1Q8TD31 782 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 NLRP7Q8WX94 980 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 CPXM1Q96SM3 734 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 ELOVL4Q9GZR5 314 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 FAM124BQ9H5Z6 455 aaPredicted RBP19.63■□□□□ 0.73
SIL1-202ENST00000394817 TJP2Q9UDY2 1190 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 ITGA11Q9UKX5 1188 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 C2CD2Q9Y426 696 aa19.63■□□□□ 0.73
SIL1-202ENST00000394817 GMNCA6NCL1 334 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 SMIM23A6NLE4 172 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 STAU1O95793 577 aaKnown RBP19.62■□□□□ 0.73
SIL1-202ENST00000394817 TTC4O95801 387 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 KRT3P12035 628 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 CDKN2BP42772 138 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 VPS41P49754 854 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 SLC25A11Q02978 314 aaKnown RBP19.62■□□□□ 0.73
SIL1-202ENST00000394817 AUHQ13825 339 aaKnown RBP19.62■□□□□ 0.73
SIL1-202ENST00000394817 RGMBQ6NW40 437 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 XYLT1Q86Y38 959 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 NT5DC4Q86YG4 428 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 RELL1Q8IUW5 271 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 RAPGEF5Q92565 580 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 TMEM176AQ96HP8 235 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 DNPEPQ9ULA0 475 aa19.62■□□□□ 0.73
SIL1-202ENST00000394817 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.62■□□□□ 0.73
SIL1-202ENST00000394817 PDCD11Q14690 1871 aaKnown RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 MANSC4A6NHS7 340 aaPredicted RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 GOLGA8SH3BPF8 625 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 ACSL3O95573 720 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 PSMA2P25787 234 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 PSMC1P62191 440 aaKnown RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 TAF1CQ15572 869 aaPredicted RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 GRIK4Q16099 956 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 DUSP28Q4G0W2 176 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 MARCH8Q5T0T0 291 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 IZUMO3Q5VZ72 239 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 ZNF410Q86VK4 478 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 HPDLQ96IR7 371 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 FOXP3Q9BZS1 431 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 ADAM7Q9H2U9 754 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 FAM169AQ9Y6X4 670 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 A0A1B0GUA9 196 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 LRRD1A4D1F6 860 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 LRCH4O75427 683 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 MMP3P08254 477 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 GABRB2P47870 512 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 IFI35P80217 286 aaPredicted RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 INCA1Q0VD86 236 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 ORC1Q13415 861 aa19.61■□□□□ 0.73
SIL1-202ENST00000394817 ZNF268Q14587 947 aaPredicted RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 HIBCHQ6NVY1 386 aaPredicted RBP19.61■□□□□ 0.73
SIL1-202ENST00000394817 GSTA5Q7RTV2 222 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms