RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HNRNPH3P31942 346 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 USP46P62068 366 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 MRPS9P82933 396 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 IL1RL1Q01638 556 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 DSG1Q02413 1049 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 GAD2Q05329 585 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 MTFR1Q15390 333 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ARSHQ5FYA8 562 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 VSTM1Q6UX27 236 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 HAUS6Q7Z4H7 955 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ZSCAN18Q8TBC5 510 aaPredicted RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 WDR60Q8WVS4 1066 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 SEMA4DQ92854 862 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 EXT2Q93063 718 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 HES6Q96HZ4 224 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 PRPF18Q99633 342 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 GRHL1Q9NZI5 618 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 DOCK2Q92608 1830 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CASQ2O14958 399 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 MSH4O15457 936 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ATP6V1G1O75348 118 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 OR6B1O95007 311 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 POLR2MP0CAP2 368 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ATP6V1C1P21283 382 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PTPN4P29074 926 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ETFBP38117 255 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 GMPSP49915 693 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.932e-7■□□□□ 9.1
RTN4-206ENST00000394611 ROR2Q01974 943 aaKnown RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 ZNF543Q08ER8 600 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PDIA5Q14554 519 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ZNF268Q14587 947 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 STAT4Q14765 748 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 RAPH1Q70E73 1250 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 THNSL1Q8IYQ7 743 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 GLIS1Q8NBF1 620 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CCNYQ8ND76 341 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 OPTNQ96CV9 577 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CLMNQ96JQ2 1002 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 AGAP3Q96P47 875 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PAFAH2Q99487 392 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 GORASP1Q9BQQ3 440 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 KIAA1586Q9HCI6 787 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 IL1RAPL1Q9NZN1 696 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ADAMTSL1Q8N6G6 1762 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CST8O60676 142 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TBX10O75333 385 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 WEE2P0C1S8 567 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 GNA15P30679 374 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 SERPINB5P36952 375 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 MLH1P40692 756 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 RAB27AP51159 221 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 WDR4P57081 412 aaKnown RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 DMP1Q13316 513 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 PDCD2Q16342 344 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 NRF1Q16656 503 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 LACTB2Q53H82 288 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 ACSBG2Q5FVE4 666 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 DENND5BQ6ZUT9 1274 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 USP37Q86T82 979 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TRIM74Q86UV6 250 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TRIM73Q86UV7 250 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 MARK4Q96L34 752 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TEKT3Q9BXF9 490 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 IL1RL2Q9HB29 575 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PLA2G4CQ9UP65 541 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 LRCH1Q9Y2L9 728 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PSME4Q14997 1843 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 MAGEA13PA6NCF6 341 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CYB561D2O14569 222 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PEX11AO75192 247 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PSMG1O95456 288 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 KCNA4P22459 653 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TNFRSF8P28908 595 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 RPL10AP62906 217 aaKnown RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 SLC12A1Q13621 1099 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ATP1A4Q13733 1029 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ABCB5Q2M3G0 1257 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CRELD2Q6UXH1 353 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 MYLK4Q86YV6 388 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 NDUFAF2Q8N183 169 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 ARHGAP18Q8N392 663 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 NME8Q8N427 588 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 DEPDC1BQ8WUY9 529 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TLCD1Q96CP7 247 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 PCDHB18PQ96TA0 734 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 NMUR2Q9GZQ4 415 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 TRPV6Q9H1D0 765 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 SEMA6AQ9H2E6 1030 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 PREBQ9HCU5 417 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 XPO7Q9UIA9 1087 aaKnown RBP9.24□□□□□ -0.93
RTN4-206ENST00000394611 COMMD10Q9Y6G5 202 aa9.24□□□□□ -0.93
RTN4-206ENST00000394611 CHRNB2P17787 502 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 ARL4CP56559 192 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PSMC1P62191 440 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 CRADDP78560 199 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SLC34A1Q06495 639 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms