RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RIT2Q99578 217 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 TRIM55Q9BYV6 548 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 UNC45AQ9H3U1 944 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 PLK2Q9NYY3 685 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 CLIC5Q9NZA1 410 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 ANAPC5Q9UJX4 755 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 ARHGEF35A5YM69 484 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 SPDYE2BA6NHP3 402 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 SPDYE6P0CI01 402 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 COMTP21964 271 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 VARSP26640 1264 aaKnown RBP19.82■□□□□ 0.76
HOXC6-202ENST00000394331 GCAP28676 217 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 RPA3P35244 121 aaPredicted RBP19.82■□□□□ 0.76
HOXC6-202ENST00000394331 ACADVLP49748 655 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 OXCT1P55809 520 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 ADCY1Q08828 1119 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 KIF22Q14807 665 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 CFAP57Q96MR6 1250 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 USP29Q9HBJ7 922 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 KIAA1586Q9HCI6 787 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.82■□□□□ 0.761e-6■■■■■ 95.1
HOXC6-202ENST00000394331 FAIMQ9NVQ4 179 aa19.82■□□□□ 0.76
HOXC6-202ENST00000394331 ATF2P15336 505 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 CYP2J2P51589 502 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 UBXN2AP68543 259 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 COG2Q14746 738 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 SLC1A5Q15758 541 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 B3GNT9Q6UX72 402 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 IKZF4Q9H2S9 585 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 hCG_2014768A0A024R1R8 64 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 IL1BP01584 269 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 ARP10275 920 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 RFX1P22670 979 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 CHN2P52757 468 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 C1orf228Q6PIY5 440 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 PLVAPQ9BX97 442 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 INTS2Q9H0H0 1204 aaKnown RBP19.81■□□□□ 0.76
HOXC6-202ENST00000394331 APEX2Q9UBZ4 518 aa19.81■□□□□ 0.76
HOXC6-202ENST00000394331 YDJCA8MPS7 323 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 IPO5O00410 1097 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 TM7SF2O76062 418 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 CA4P22748 312 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 CHRNA5P30532 468 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 TBL3Q12788 808 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 SPIDRQ14159 915 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 DLGAP5Q15398 846 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 KYAT3Q6YP21 454 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 NOP9Q86U38 636 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 FNDC8Q8TC99 324 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 POP1Q99575 1024 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 LXNQ9BS40 222 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 GPR88Q9GZN0 384 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 BRD8Q9H0E9 1235 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 RBM38Q9H0Z9 239 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 CSDE1O75534 798 aaKnown RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 FGFR1P11362 822 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 PORP16435 677 aaPredicted RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 MYL7Q01449 175 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 BORAQ6PGQ7 559 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 RIPOR1Q6ZS17 1223 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 CCDC80Q76M96 950 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 KSR1Q8IVT5 923 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 RFWD2Q8NHY2 731 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 FAM172AQ8WUF8 416 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 CORO1BQ9BR76 489 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 ARHGEF4Q9NR80 690 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 WRAP73Q9P2S5 460 aaPredicted RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 FEM1BQ9UK73 627 aa19.8■□□□□ 0.76
HOXC6-202ENST00000394331 ZNF646O15015 1829 aaPredicted RBP19.8■□□□□ 0.76
HOXC6-202ENST00000394331 BRWD3Q6RI45 1802 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 EXOC1LA0A1B0GW35 172 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 SMIM18P0DKX4 95 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ARFIP2P53365 341 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 CBWD6Q4V339 395 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 CBWD3Q5JTY5 395 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 CBWD5Q5RIA9 395 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ANKS1BQ7Z6G8 1248 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 RASSF3Q86WH2 238 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 LDHDQ86WU2 507 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 FAM161BQ96MY7 647 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 BTBD9Q96Q07 612 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 MXRA8Q9BRK3 442 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 DEFB129Q9H1M3 183 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 TAS2R14Q9NYV8 317 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ZNF70Q9UC06 446 aaPredicted RBP19.79■□□□□ 0.76
HOXC6-202ENST00000394331 POLIQ9UNA4 740 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 PLA2G4CQ9UP65 541 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 DMTF1Q9Y222 760 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 SLX4Q8IY92 1834 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 CLRN2A0PK11 232 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 GPC5P78333 572 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 BFSP1Q12934 665 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 DNAL1Q4LDG9 190 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 SGO2Q562F6 1265 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 SH3D19Q5HYK7 790 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 UGT2A3Q6UWM9 527 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 CROCCP3Q8IVE0 287 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ZFRQ96KR1 1074 aaKnown RBP19.79■□□□□ 0.76
HOXC6-202ENST00000394331 PANX3Q96QZ0 392 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 STRA6Q9BX79 667 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms