RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 MEI1Q5TIA1 1274 aa23.42■■□□□ 1.34
CACNB1-203ENST00000394310 OSTM1Q86WC4 334 aa23.42■■□□□ 1.34
CACNB1-203ENST00000394310 MRPL47Q9HD33 250 aaKnown RBP23.42■■□□□ 1.34
CACNB1-203ENST00000394310 TSPAN16Q9UKR8 245 aa23.42■■□□□ 1.34
CACNB1-203ENST00000394310 STRIP2Q9ULQ0 834 aa23.42■■□□□ 1.34
CACNB1-203ENST00000394310 ATP1A1P05023 1023 aaKnown RBP23.41■■□□□ 1.34
CACNB1-203ENST00000394310 SETSIPP0DME0 302 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 TYMPP19971 482 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 RRM1P23921 792 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 ITGB8P26012 769 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 RNASELQ05823 741 aaKnown RBP23.41■■□□□ 1.34
CACNB1-203ENST00000394310 C11orf63Q6NUN7 778 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 ERICH1Q86X53 443 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 STK32AQ8WU08 396 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 FAM193BQ96PV7 902 aaPredicted RBP23.41■■□□□ 1.34
CACNB1-203ENST00000394310 NUP85Q9BW27 656 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 PRDM5Q9NQX1 630 aaPredicted RBP23.41■■□□□ 1.34
CACNB1-203ENST00000394310 MRFAP1Q9Y605 127 aa23.41■■□□□ 1.34
CACNB1-203ENST00000394310 B4GALT3O60512 393 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 PDGFRBP09619 1106 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 RAG1P15918 1043 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 SSTR3P32745 418 aaPredicted RBP23.4■■□□□ 1.34
CACNB1-203ENST00000394310 GABRB2P47870 512 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 TERF1P54274 439 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 MMS22LQ6ZRQ5 1243 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 TMEM199Q8N511 208 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 B3GALNT2Q8NCR0 500 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 MSANTD4Q8NCY6 345 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 TLR10Q9BXR5 811 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 DPEP3Q9H4B8 488 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 CDC23Q9UJX2 597 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 SAR1BQ9Y6B6 198 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 SCINQ9Y6U3 715 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 TCRBV5S1A1TA0A578 114 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 ENC1O14682 589 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 BUB1BO60566 1050 aaPredicted RBP23.4■■□□□ 1.34
CACNB1-203ENST00000394310 KIF4AO95239 1232 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 ANKRD52Q8NB46 1076 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 RABGGTAQ92696 567 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 C11orf70Q9BRQ4 267 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 TMEM175Q9BSA9 504 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 PARVAQ9NVD7 372 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 CYTH4Q9UIA0 394 aa23.4■■□□□ 1.34
CACNB1-203ENST00000394310 LTBP2Q14767 1821 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 M0QYV0 167 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 PTPN1P18031 435 aaKnown RBP23.39■■□□□ 1.33
CACNB1-203ENST00000394310 MAMLD1Q13495 774 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 DAAM2Q86T65 1068 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 ZNF564Q8TBZ8 553 aaPredicted RBP23.39■■□□□ 1.33
CACNB1-203ENST00000394310 SLC35F5Q8WV83 523 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 HNRNPABQ99729 332 aaKnown RBP23.39■■□□□ 1.33
CACNB1-203ENST00000394310 MIS12Q9H081 205 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 NRDE2Q9H7Z3 1164 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 DDX43Q9NXZ2 648 aaKnown RBP23.39■■□□□ 1.33
CACNB1-203ENST00000394310 WDR35Q9P2L0 1181 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 HESX1Q9UBX0 185 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 CDH9Q9ULB4 789 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 SNX12Q9UMY4 172 aa23.39■■□□□ 1.33
CACNB1-203ENST00000394310 TRAPPC3O43617 180 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 PCSK1P29120 753 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.38■■□□□ 1.33
CACNB1-203ENST00000394310 NT5DC3Q86UY8 548 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 METTL23Q86XA0 190 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 TOP1MTQ969P6 601 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 C18orf8Q96DM3 657 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 ACBD6Q9BR61 282 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 LCMT1Q9UIC8 334 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 PCDHB8Q9UN66 801 aa23.38■■□□□ 1.33
CACNB1-203ENST00000394310 RIOK3O14730 519 aaKnown RBP23.37■■□□□ 1.33
CACNB1-203ENST00000394310 ATMINO43313 823 aaPredicted RBP23.37■■□□□ 1.33
CACNB1-203ENST00000394310 ALDH2P05091 517 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 ITGB1P05556 798 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 CSF2RAP15509 400 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 RPL34P49207 117 aaKnown RBP23.37■■□□□ 1.33
CACNB1-203ENST00000394310 TAP1Q03518 808 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 PDCLQ13371 301 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 ZNF268Q14587 947 aaPredicted RBP23.37■■□□□ 1.33
CACNB1-203ENST00000394310 PTPN20Q4JDL3 420 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 TTC30AQ86WT1 665 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 CYLDQ9NQC7 956 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 HCRTO43612 131 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 DGKIO75912 1065 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 TCP1P17987 556 aaKnown RBP23.37■■□□□ 1.33
CACNB1-203ENST00000394310 BRCC3P46736 316 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 OR1G1P47890 313 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 PLCB3Q01970 1234 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 GOLGA7BQ2TAP0 167 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 PPP1R15BQ5SWA1 713 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 C3orf20Q8ND61 904 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 CPXM1Q96SM3 734 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 DNAJB4Q9UDY4 337 aa23.37■■□□□ 1.33
CACNB1-203ENST00000394310 FNDC1Q4ZHG4 1894 aaPredicted RBP23.36■■□□□ 1.33
CACNB1-203ENST00000394310 BAIAP3O94812 1187 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 BCAT1P54687 386 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 SNX16P57768 344 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 PEX26Q7Z412 305 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 TMEM110Q86TL2 294 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 LRRC43Q8N309 656 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 HES6Q96HZ4 224 aa23.36■■□□□ 1.33
CACNB1-203ENST00000394310 RTP3Q9BQQ7 232 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms