RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ARSAP15289 507 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 AVPR1AP37288 418 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 MPLP40238 635 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 ACOT2P49753 483 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 TAF6P49848 677 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 GTF2BQ00403 316 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 SMARCB1Q12824 385 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 GRSF1Q12849 480 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHMP3-202ENST00000393773 PTPAQ15257 358 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 STPG1Q5TH74 334 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 WSCD1Q658N2 575 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 NAIF1Q69YI7 327 aaPredicted RBP16.6■□□□□ 0.25
CHMP3-202ENST00000393773 EFCAB13Q8IY85 973 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 MYCT1Q8N699 235 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 MAB21L3Q8N8X9 362 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 TMLHEQ9NVH6 421 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 PCDHGA5Q9Y5G8 931 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 ATG13O75143 517 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 DDX6P26196 483 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHMP3-202ENST00000393773 GPR15P49685 360 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 MCTP1Q6DN14 999 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 METTL23Q86XA0 190 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 ABCA7Q8IZY2 2146 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 EZH1Q92800 747 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-202ENST00000393773 CHAMP1Q96JM3 812 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 AK8Q96MA6 479 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 HHIPQ96QV1 700 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 FBRSL1Q9HCM7 1045 aaKnown RBP16.59■□□□□ 0.25
CHMP3-202ENST00000393773 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 SLC8A2Q9UPR5 921 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
CHMP3-202ENST00000393773 PLCG1P19174 1290 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 BFSP1Q12934 665 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 USP4Q13107 963 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 MCM6Q14566 821 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 ZNF268Q14587 947 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-202ENST00000393773 PLK5Q496M5 336 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 TXNDC8Q6A555 127 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 TCEAL6Q6IPX3 200 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 CRELD2Q6UXH1 353 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-202ENST00000393773 THEM5Q8N1Q8 247 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 TCEAL3Q969E4 200 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 DUSP15Q9H1R2 295 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-202ENST00000393773 IKZF4Q9H2S9 585 aa16.58■□□□□ 0.24
CHMP3-202ENST00000393773 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 TBCAO75347 108 aaKnown RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 DRD1P21728 446 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 GJA4P35212 333 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 WNT7BP56706 349 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 ZNF77Q15935 545 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 TAF12Q16514 161 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 SV2CQ496J9 727 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 ZC2HC1CQ53FD0 456 aaPredicted RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 ADALQ6DHV7 355 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 MON1AQ86VX9 555 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 DCP1BQ8IZD4 617 aaKnown RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 CAMKK1Q8N5S9 505 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 RAD54LQ92698 747 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 P2RY13Q9BPV8 354 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 ST6GALNAC4Q9H4F1 302 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 VPS45Q9NRW7 570 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 AGO2Q9UKV8 859 aaKnown RBP16.57■□□□□ 0.24
CHMP3-202ENST00000393773 PCDHB5Q9Y5E4 795 aa16.57■□□□□ 0.24
CHMP3-202ENST00000393773 KPNA7A9QM74 516 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 NOL4O94818 638 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 KCNK5O95279 499 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 CSH1P0DML2 217 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 CSH2P0DML3 217 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 ABCD1P33897 745 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 POU5F1Q01860 360 aaKnown RBP16.56■□□□□ 0.24
CHMP3-202ENST00000393773 GRIN1Q05586 938 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 MTF1Q14872 753 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
CHMP3-202ENST00000393773 PDGFRLQ15198 375 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 SDHAF4Q5VUM1 108 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 RPLP0P6Q8NHW5 317 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 MRPS31Q92665 395 aaKnown RBP16.56■□□□□ 0.24
CHMP3-202ENST00000393773 CALML4Q96GE6 196 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 TRMT2BQ96GJ1 504 aaKnown RBP16.56■□□□□ 0.24
CHMP3-202ENST00000393773 ZNF560Q96MR9 790 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 PKMYT1Q99640 499 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 PI4K2AQ9BTU6 479 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
CHMP3-202ENST00000393773 ZFYVE26Q68DK2 2539 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 CEP192Q8TEP8 1941 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 PPP1R37O75864 691 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 ADSSP30520 456 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 GALK1P51570 392 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 TSPY1Q01534 308 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 CCDC142Q17RM4 750 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 FBXO43Q4G163 708 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 SYT13Q7L8C5 426 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 CPA6Q8N4T0 437 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 SLC22A12Q96S37 553 aa16.55■□□□□ 0.24
CHMP3-202ENST00000393773 EDEM2Q9BV94 578 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms