RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PIGHQ14442 188 aaPredicted RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 STAT4Q14765 748 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 METTL7BQ6UX53 244 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 SYDE1Q6ZW31 735 aaPredicted RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 CCDC33Q8N5R6 958 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 PPP1R13LQ8WUF5 828 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 CPB2Q96IY4 423 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 FGD4Q96M96 766 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 VCX3BQ9H321 246 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 VCX3AQ9NNX9 186 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 ASNSD1Q9NWL6 643 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 R3HDM2Q9Y2K5 976 aaKnown RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 DDX60LQ5H9U9 1706 aaKnown RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 MYH11P35749 1972 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 PSTPIP1O43586 416 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 ATP6V1G2O95670 118 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 TTC4O95801 387 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 RBP3P10745 1247 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 ETS1P14921 441 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 CENPCQ03188 943 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 GJC2Q5T442 439 aaPredicted RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 LGSNQ5TDP6 509 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 ABHD15Q6UXT9 468 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 EIF1ADQ8N9N8 165 aaKnown RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 FAM71DQ8N9W8 422 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 DDX56Q9NY93 547 aaKnown RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 WHRNQ9P202 907 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 PCYOX1Q9UHG3 505 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 SH3BP1Q9Y3L3 701 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 TXNDC9O14530 226 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 NDC80O14777 642 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 MAPK13O15264 365 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 ADORA2BP29275 332 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 PSMC4P43686 418 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 MAMLD1Q13495 774 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 AMHR2Q16671 573 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 GLRA4Q5JXX5 417 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 PPM1NQ8N819 430 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 CCDC110Q8TBZ0 833 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 SPATA18Q8TC71 538 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 MCUR1Q96AQ8 359 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 RILPQ96NA2 401 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 FAM129AQ9BZQ8 928 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 TMEM59LQ9UK28 342 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 A0A0G2JND7 137 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 I3L4J1 428 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 TRAPPC3O43617 180 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 PECAM1P16284 738 aaPredicted RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 SDC4P31431 198 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 OAZ1P54368 228 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 BCAR1P56945 870 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 PDE1CQ14123 709 aaPredicted RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 TTC13Q8NBP0 860 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 ROPN1BQ9BZX4 212 aaPredicted RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 ROPN1Q9HAT0 212 aaPredicted RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 ZNF214Q9UL59 606 aaPredicted RBP11.06□□□□□ -0.64
CALD1-203ENST00000393118 CHMP2BQ9UQN3 213 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 CCDC189A1A4V9 331 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 PDGFRBP09619 1106 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 DNAJC3Q13217 504 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 FAXCQ5TGI0 409 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 TMEM154Q6P9G4 183 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 VPS52Q8N1B4 723 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 LMO3Q8TAP4 145 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 ACAP3Q96P50 834 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 CAMKK2Q96RR4 588 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 GPR88Q9GZN0 384 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 SNX25Q9H3E2 840 aa11.06□□□□□ -0.64
CALD1-203ENST00000393118 A0A087WZ62 844 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 CST3P01034 146 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 OTUD4Q01804 1114 aaKnown RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 MAP7Q14244 749 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 TMEM132DQ14C87 1099 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 PLCB4Q15147 1175 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 CCNG2Q16589 344 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 SPATA21Q7Z572 469 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 EXD1Q8NHP7 514 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ACTL9Q8TC94 416 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 KLRG1Q96E93 195 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 HPDLQ96IR7 371 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 RAB3IPQ96QF0 476 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 FDXACB1Q9BRP7 624 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 ECT2Q9H8V3 914 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ZFATQ9P243 1243 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 LAMB1P07942 1786 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 SHOX2O60902 331 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 TPP2P29144 1249 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 TNFAIP2Q03169 654 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 QPCTQ16769 361 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 C6orf163Q5TEZ5 329 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 SPOCD1Q6ZMY3 1216 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms