RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 CCNJLQ8IV13 435 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 TFB1MQ8WVM0 346 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 VCPIP1Q96JH7 1222 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 CENPKQ9BS16 269 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 MTO1Q9Y2Z2 717 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 PIK3CDO00329 1044 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 ODC1P11926 461 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 SYCP2LQ5T4T6 812 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 ICE2Q659A1 982 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 TRPM8Q7Z2W7 1104 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 EGFL8Q99944 293 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 MGEA5O60502 916 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 PGK2P07205 417 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 NCAM1P13591 858 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 USP10Q14694 798 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 DNAL1Q4LDG9 190 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 LINC00523Q86TU6 105 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 CNPY3Q9BT09 278 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 PCMTD2Q9NV79 361 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 DMGDHQ9UI17 866 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 F9P00740 461 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 PGM1P36871 562 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 BCAT1P54687 386 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 PTENP60484 403 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 STAMBPL1Q96FJ0 436 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 NPHS2Q9NP85 383 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 HACD3Q9P035 362 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 EML1O00423 815 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 GPR182O15218 404 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 TMCC1O94876 653 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 CYBBP04839 570 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 MYL6P60660 151 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 PHEXP78562 749 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 HIC1Q14526 733 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 ZFPM1Q8IX07 1006 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 RAB21Q9UL25 225 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 MCF2P10911 925 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 SLC2A3P11169 496 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 ARHGDIAP52565 204 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 TBCCQ15814 346 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 LVRNQ6Q4G3 990 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 ABCF3Q9NUQ8 709 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 DNAJC8O75937 253 aaPredicted RBP13.18□□□□□ -0.3
CLTC-202ENST00000393043 PTGER2P43116 358 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
CLTC-202ENST00000393043 TTC23LQ6PF05 361 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 ANO5Q75V66 913 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 ANKZF1Q9H8Y5 726 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
CLTC-202ENST00000393043 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 EEF1B2P24534 225 aaKnown RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 KRT33BQ14525 404 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 SMAD1Q15797 465 aaKnown RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 HABP4Q5JVS0 413 aaKnown RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 TRIML2Q8N7C3 387 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 SNX19Q92543 992 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 KLHL2O95198 593 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 KRT4P19013 534 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 SPOCD1Q6ZMY3 1216 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 MCOLN2Q8IZK6 566 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 NCLNQ969V3 563 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 NDFIP2Q9NV92 336 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 SIGLEC1Q9BZZ2 1709 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
CLTC-202ENST00000393043 CCT8L1PA6NM43 557 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 ZBBXA8MT70 800 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 ANXA9O76027 345 aa13.17□□□□□ -0.3
CLTC-202ENST00000393043 GFAPP14136 432 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms