RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CYP39A1Q9NYL5 469 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 PSTPIP1O43586 416 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 RPA1P27694 616 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 KRR1Q13601 381 aaKnown RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 CAPRIN1Q14444 709 aaKnown RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 HABP4Q5JVS0 413 aaKnown RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 CPA5Q8WXQ8 436 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 RSAD1Q9HA92 442 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 AGO2Q9UKV8 859 aaKnown RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 MYBP10242 640 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 PHKA2P46019 1235 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 SESN2P58004 480 aaPredicted RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 TNFAIP2Q03169 654 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 C1orf131Q8NDD1 294 aaKnown RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 OR6B3Q8NGW1 331 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 DHX35Q9H5Z1 703 aaKnown RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 FAM237AA0A1B0GTK4 181 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 SNX3O60493 162 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 STIP1P31948 543 aaKnown RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 PMS1P54277 932 aaKnown RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 ZNF507Q8TCN5 953 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 ATP8B4Q8TF62 1192 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 RPL26L1Q9UNX3 145 aaKnown RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 RGS2P41220 211 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 DUOXA2Q1HG44 320 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 APBB2Q92870 758 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 FAM49AQ9H0Q0 323 aaPredicted RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 KLHL11Q9NVR0 708 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 C2CD2Q9Y426 696 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 ABLIM1O14639 778 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 GPC3P51654 580 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 CXCL9Q07325 125 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 NFX1Q12986 1120 aaKnown RBP20.53■□□□□ 0.88
SHANK1-203ENST00000391813 KBTBD12Q3ZCT8 623 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 PID1Q7Z2X4 250 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 MAGEC3Q8TD91 643 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 TMEM106CQ9BVX2 250 aa20.53■□□□□ 0.88
SHANK1-203ENST00000391813 PXDNQ92626 1479 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 ZNF839A8K0R7 811 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 SRGAP2CP0DJJ0 459 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 RAP1GDS1P52306 607 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 ERMARDQ5T6L9 678 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 C4orf50Q6ZRC1 276 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 PSPC1Q8WXF1 523 aaKnown RBP20.52■□□□□ 0.88
SHANK1-203ENST00000391813 NAALADL1Q9UQQ1 740 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 LIN7AO14910 233 aaPredicted RBP20.52■□□□□ 0.88
SHANK1-203ENST00000391813 GTF2A2P52657 109 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 KRT35Q92764 455 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 C2orf40Q9H1Z8 148 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 PPIDQ08752 370 aaKnown RBP20.52■□□□□ 0.88
SHANK1-203ENST00000391813 DDIASQ8IXT1 998 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 EFCAB1Q9HAE3 211 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 TOPORSQ9NS56 1045 aaPredicted RBP20.52■□□□□ 0.88
SHANK1-203ENST00000391813 NSMCE4AQ9NXX6 385 aa20.52■□□□□ 0.88
SHANK1-203ENST00000391813 ATP5BP06576 529 aaKnown RBP20.51■□□□□ 0.87
SHANK1-203ENST00000391813 RFC5P40937 340 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 NUDT2P50583 147 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 TMEM120AQ9BXJ8 343 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 TMEM39BQ9GZU3 492 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 ZNF302Q9NR11 478 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 CST8O60676 142 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 MYCP01106 439 aaPredicted RBP20.51■□□□□ 0.87
SHANK1-203ENST00000391813 ALBP02768 609 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 APOA4P06727 396 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 PECAM1P16284 738 aaPredicted RBP20.51■□□□□ 0.87
SHANK1-203ENST00000391813 C11orf63Q6NUN7 778 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 ERO1BQ86YB8 467 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 ZNF786Q8N393 782 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 CHST13Q8NET6 341 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 SEMA6BQ9H3T3 888 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 FAM58BPP0C7Q3 252 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 RASA1P20936 1047 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 PLOD1Q02809 727 aaPredicted RBP20.51■□□□□ 0.87
SHANK1-203ENST00000391813 EFHC2Q5JST6 749 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 ACAD10Q6JQN1 1059 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 SPATA18Q8TC71 538 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 TMEM8AQ9HCN3 771 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 TNFAIP8O95379 198 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 GFAPP14136 432 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 SNRNP35Q16560 246 aaKnown RBP20.51■□□□□ 0.87
SHANK1-203ENST00000391813 CNDP1Q96KN2 507 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 ATP8B3O60423 1300 aa20.51■□□□□ 0.87
SHANK1-203ENST00000391813 GTPBP10A4D1E9 387 aaKnown RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 GLRA3O75311 464 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 ABL1P00519 1130 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 IFNA8P32881 189 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 OASLQ15646 514 aaKnown RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 NTRK3Q16288 839 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 FEZF2Q8TBJ5 459 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 MPP4Q96JB8 637 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 TEKT2Q9UIF3 430 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 SPDYE2BA6NHP3 402 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 TFRCP02786 760 aaKnown RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 SPDYE6P0CI01 402 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 CLK1P49759 484 aaKnown RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 DCTN2Q13561 401 aaKnown RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 EP400NLQ6ZTU2 488 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms