RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZC3H15Q8WU90 426 aaKnown RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 JPH3Q8WXH2 748 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 LPIN2Q92539 896 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 GLG1Q92896 1179 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 COPS5Q92905 334 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM125Q96AQ2 219 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 KLHL29Q96CT2 875 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ATG4CQ96DT6 458 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 SENP5Q96HI0 755 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ABHD8Q96I13 439 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 FUBP3Q96I24 572 aaKnown RBP eCLIP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 DYDC2Q96IM9 177 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 CHAMP1Q96JM3 812 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ZBTB45Q96K62 511 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 EXOC2Q96KP1 924 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 PHACTR3Q96KR7 559 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 F2RL3Q96RI0 385 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 MED15Q96RN5 788 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ORAI2Q96SN7 254 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 LITAFQ99732 161 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ZSWIM1Q9BR11 485 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 EFHD1Q9BUP0 239 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 MCRIP2Q9BUT9 160 aaKnown RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ALG8Q9BVK2 526 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 AMNQ9BXJ7 453 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM117AQ9C073 453 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 DCLK3Q9C098 648 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF700Q9H0M5 742 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 OSBPL2Q9H1P3 480 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ASB8Q9H765 288 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 VRTNQ9H8Y1 702 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF334Q9HCZ1 680 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 TLR8Q9NR97 1041 aaKnown RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 CYTL1Q9NRR1 136 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 KLC4Q9NSK0 619 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ZDHHC18Q9NUE0 388 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 CCDC87Q9NVE4 849 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 INTS13Q9NVM9 706 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 RIC8BQ9NVN3 520 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 POLR3BQ9NW08 1133 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 GPR83Q9NYM4 423 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 GTSE1Q9NYZ3 720 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 GPRC5DQ9NZD1 345 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 BTBD7Q9P203 1132 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 PLEKHB1Q9UF11 243 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 CGGBP1Q9UFW8 167 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 SEPT3Q9UH03 358 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 FBXL7Q9UJT9 491 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF223Q9UK11 482 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 DSEQ9UL01 958 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 BRPF3Q9ULD4 1205 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 POLR3KQ9Y2Y1 108 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 TELO2Q9Y4R8 837 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 PCDHA2Q9Y5H9 948 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 NUMBLQ9Y6R0 609 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 MUC2Q02817 5179 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 TTBK1Q5TCY1 1321 aaPredicted RBP-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 ADGRA2Q96PE1 1338 aa-0.19□□□□□ -2.44
TRAJ28-201ENST00000390509 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FBN2P35556 2912 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 AGRNO00468 2067 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM272A0A1B0GTI8 110 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A1W2PP11 408 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RPS10-NUDT3A0A1W2PQS6 291 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A1W2PS29 197 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CLEC18AA5D8T8 446 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CFAP69A5D8W1 941 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PRAMEF25A6NGN4 478 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 OR6C75A6NL08 312 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TBKBP1A7MCY6 615 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MEIS3P2A8K0S8 358 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SERPINE3A8MV23 424 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 VWC2LB2RUY7 222 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 EPM2AB3EWF7 344 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 E9PQ18 207 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 H0YGN5 161 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 H0YIZ8 118 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KIR2DS3K7RE56 304 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CDX4O14627 284 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GIPC1O14908 333 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KIAA0391O15091 583 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MAGEB4O15481 346 aaPredicted RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PJA2O43164 708 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CBFA2T2O43439 604 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CCNT1O60563 726 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LRP3O75074 770 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 VAMP4O75379 141 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ALDH1A2O94788 518 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FSBPO95073 299 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GLUD1P00367 558 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CFBP00751 764 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 IGLV1-44P01699 117 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CRYAAP02489 173 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FGAP02671 866 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CD5P06127 495 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 IGKV4-1P06312 121 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 USP17L7P0C7H9 530 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CLEC2LP0C7M8 214 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FGF5P12034 268 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms