RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 OXCT2Q9BYC2 517 aaPredicted RBP12.8□□□□□ -0.36
SOD1-202ENST00000389995 FSCN3Q9NQT6 498 aa12.8□□□□□ -0.36
SOD1-202ENST00000389995 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
SOD1-202ENST00000389995 APC2O95996 2303 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 CLDN3O15551 220 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 TOM1L1O75674 476 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 TYMPP19971 482 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 CDC25AP30304 524 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 NLRP12P59046 1061 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 LILRA4P59901 499 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 STRN3Q13033 797 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 KARSQ15046 597 aaKnown RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 ANO7Q6IWH7 933 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 RINT1Q6NUQ1 792 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 C19orf48Q6RUI8 117 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 TSTD1Q8NFU3 115 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 SNX29Q8TEQ0 813 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 GTF3C6Q969F1 213 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 ZCWPW1Q9H0M4 648 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 TBX20Q9UMR3 447 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 UBQLN1Q9UMX0 589 aaKnown RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
SOD1-202ENST00000389995 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
SOD1-202ENST00000389995 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 F11P03951 625 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 CLTAP09496 248 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 ODC1P11926 461 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
SOD1-202ENST00000389995 MUTP22033 750 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
SOD1-202ENST00000389995 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 MCL1Q07820 350 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 ENOX2Q16206 610 aaKnown RBP12.78□□□□□ -0.36
SOD1-202ENST00000389995 C2orf27AQ580R0 203 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 C1orf186Q6ZWK4 172 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 C4orf32Q8N8J7 132 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 TMEM161BQ8NDZ6 487 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 ECT2Q9H8V3 914 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 TMEM74BQ9NUR3 256 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
SOD1-202ENST00000389995 MAGED2Q9UNF1 606 aaPredicted RBP12.78□□□□□ -0.36
SOD1-202ENST00000389995 NEUROG3Q9Y4Z2 214 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 ATXN2Q99700 1313 aaKnown RBP12.78□□□□□ -0.36
SOD1-202ENST00000389995 SHROOM3Q8TF72 1996 aa12.78□□□□□ -0.36
SOD1-202ENST00000389995 GOLGA4Q13439 2230 aaKnown RBP12.77□□□□□ -0.36
SOD1-202ENST00000389995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 NPHP3-ACAD11A0A0J9YXS1 232 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 MAPTP10636 758 aaKnown RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
SOD1-202ENST00000389995 CYP3A5P20815 502 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
SOD1-202ENST00000389995 FAM193AP78312 1265 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 SIM1P81133 766 aaPredicted RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 ST3GAL1Q11201 340 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 MTF1Q14872 753 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 USP39Q53GS9 565 aaKnown RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 JADE1Q6IE81 842 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 SFTPA1Q8IWL2 248 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 TMEFF1Q8IYR6 380 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 CD101Q93033 1021 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 BICD1Q96G01 975 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 DNM3Q9UQ16 869 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 MSRB2Q9Y3D2 182 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 PCDH15Q96QU1 1955 aa12.77□□□□□ -0.37
SOD1-202ENST00000389995 ASH1LQ9NR48 2969 aaKnown RBP12.77□□□□□ -0.37
SOD1-202ENST00000389995 NFICP08651 508 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 PTGER3P43115 390 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 AMPD2Q01433 879 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 PDGFRLQ15198 375 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 FBXO43Q4G163 708 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 C9orf57Q5W0N0 161 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 CHCHD4Q8N4Q1 142 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 ACDQ96AP0 544 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 PLIN2Q99541 437 aa12.76□□□□□ -0.37
SOD1-202ENST00000389995 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms