RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TOR1BO14657 336 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZBED1O96006 694 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 BMP5P22003 454 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 PPIFP30405 207 aaKnown RBP2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 CXCR5P32302 372 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 PHKA1P46020 1223 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 MAPK10P53779 464 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 ELLP55199 621 aaPredicted RBP2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 LONRF3Q496Y0 759 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 AMOTQ4VCS5 1084 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 DAAM2Q86T65 1068 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 MYO1HQ8N1T3 1032 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 SH2D3CQ8N5H7 860 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 IL31RAQ8NI17 732 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 ACTRT2Q8TDY3 377 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 MAML1Q92585 1016 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 FAM136AQ96C01 138 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 NMD3Q96D46 503 aaKnown RBP2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZG16BQ96DA0 208 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 SUCLG2Q96I99 432 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 UROC1Q96N76 676 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 MOGAT1Q96PD6 335 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 B3GNT5Q9BYG0 378 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 SMOC2Q9H3U7 446 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZMAT3Q9HA38 289 aaKnown RBP2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 SERTAD4Q9NUC0 356 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 LRIT1Q9P2V4 623 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 XPR1Q9UBH6 696 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 SSX2IPQ9Y2D8 614 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 RAD54BQ9Y620 910 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GOLGA6CA6NDK9 693 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GOLGA6BA6NDN3 693 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 CAPN8A6NHC0 703 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ISM1B1AKI9 464 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 F5H697 171 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GCOM1H8Y6P7 765 aaPredicted RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 KIAA0355O15063 1070 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 TJP3O95049 919 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 UNC5CO95185 931 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GRPP07492 148 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GOLGA6DP0CG33 693 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 XRCC6P12956 609 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ITGALP20701 1170 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 LRPAP1P30533 357 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLC11A2P49281 568 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZNF134P52741 427 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GALEQ14376 348 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 IQCB1Q15051 598 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ICE2Q659A1 982 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLC30A10Q6XR72 485 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GRASPQ7Z6J2 395 aaPredicted RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 PEG10Q86TG7 708 aaKnown RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ADGRG3Q86Y34 549 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 DNAJC10Q8IXB1 793 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 CAMKK1Q8N5S9 505 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 CELF5Q8N6W0 485 aaKnown RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 B3GALNT2Q8NCR0 500 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 TTC8Q8TAM2 541 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZNF764Q96H86 408 aaPredicted RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 MSLNLQ96KJ4 702 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLC46A1Q96NT5 459 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 NT5C1BQ96P26 610 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 DUSP26Q9BV47 211 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 PTDSS2Q9BVG9 487 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 R3HDMLQ9H3Y0 253 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLAMF7Q9NQ25 335 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 SERHLQ9NQF3 203 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 XPNPEP3Q9NQH7 507 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 CNNM1Q9NRU3 951 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 GOLGA6AQ9NYA3 693 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ARPP21Q9UBL0 812 aaPredicted RBP2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 TCEAL9Q9UHQ7 104 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZNHIT2Q9UHR6 403 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 TLK1Q9UKI8 766 aa2.92□□□□□ -1.94
RNU6-541P-201ENST00000384709 ONECUT2O95948 504 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 NUDT3O95989 172 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 IGLV2-14P01704 120 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 RPL17P18621 184 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 CD6P30203 668 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 PLA2G5P39877 138 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 ATXN1P54253 815 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 CACNB3P54284 484 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 HNRNPA0Q13151 305 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 CTBP1Q13363 440 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 BMPR2Q13873 1038 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 CNN3Q15417 329 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 GFOD2Q3B7J2 385 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 PREPLQ4J6C6 727 aaPredicted RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 CCDC157Q569K6 752 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 COLEC12Q5KU26 742 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 RBM20Q5T481 1227 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 TEDDM1Q5T9Z0 273 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 VPS53Q5VIR6 699 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 STRIP1Q5VSL9 837 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 KAZNQ674X7 775 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 ANKRD16Q6P6B7 361 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 APOA5Q6Q788 366 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms